Gene : Glyma.05G168900 G. max Wm82.a2.v1
Defline:  (1 of 1) KOG2770 - Aminomethyl transferase Genomic Order:  1689
Name:  ? Glyma.05G168900 Secondary Identifier:  ? PAC:30526779
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLYCLEAV-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G168900 0.5kb upstream 0.5kb upstream 10441 true Chr05: 35937119-35947559 Glycine max
Glyma.05G168900 0.5kb upstream 0.5kb upstream 500 false Chr05: 35947060-35947559 Glycine max
Glyma.05G168900 0.5kb downstream 0.5kb downstream 10441 true Chr05: 35936619-35947059 Glycine max
Glyma.05G168900 0.5kb downstream 0.5kb downstream 500 false Chr05: 35936619-35937118 Glycine max
Glyma.05G168900 1.0kb upstream 1.0kb upstream 10941 true Chr05: 35937119-35948059 Glycine max
Glyma.05G168900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35947060-35948059 Glycine max
Glyma.05G168900 1.0kb downstream 1.0kb downstream 10941 true Chr05: 35936119-35947059 Glycine max
Glyma.05G168900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35936119-35937118 Glycine max
Glyma.05G168900 2.0kb upstream 2.0kb upstream 11941 true Chr05: 35937119-35949059 Glycine max
Glyma.05G168900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35947060-35949059 Glycine max
Glyma.05G168900 2.0kb downstream 2.0kb downstream 11941 true Chr05: 35935119-35947059 Glycine max
Glyma.05G168900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35935119-35937118 Glycine max
Glyma.05G168900 5.0kb upstream 5.0kb upstream 14941 true Chr05: 35937119-35952059 Glycine max
Glyma.05G168900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35947060-35952059 Glycine max
Glyma.05G168900 5.0kb downstream 5.0kb downstream 14941 true Chr05: 35932119-35947059 Glycine max
Glyma.05G168900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35932119-35937118 Glycine max
Glyma.05G168900 10.0kb upstream 10.0kb upstream 19941 true Chr05: 35937119-35957059 Glycine max
Glyma.05G168900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35947060-35957059 Glycine max
Glyma.05G168900 10.0kb downstream 10.0kb downstream 19941 true Chr05: 35927119-35947059 Glycine max
Glyma.05G168900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35927119-35937118 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307093 5265 Fabidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.50492 0.0 24.3079    
cufflinks 7.19542 0.0 26.3183   High
cufflinks 5.9495 0.0 22.874    
cufflinks 4.15334 0.0 17.556    
cufflinks 2.90424 0.0 13.7234   Low
cufflinks 2.40573 0.0 12.1826   Low
cufflinks 7.21386 0.0 29.5575   High
cufflinks 4.03609 0.0 17.2659    
cufflinks 3.27449 0.0 15.0376    
cufflinks 0.172        
cufflinks 0.077       Low
cufflinks 0.289        
cufflinks 0.109        
cufflinks 0.09       Low
cufflinks 0.133        
cufflinks 0.634       High
cufflinks 0.129        
cufflinks 0.28        
cufflinks 0.364        
cufflinks 0.769       High
cufflinks 0.099       Low
cufflinks 0.704       High
cufflinks 0.679       High
cufflinks 0.131        
cufflinks 0.697       High
cufflinks 0.111        

0 Strain