Gene : Glyma.05G169500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22811//PTHR22811:SF68 - TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN Genomic Order:  1695
Name:  ? Glyma.05G169500 Secondary Identifier:  ? PAC:30527585
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G169500 0.5kb upstream 0.5kb upstream 4302 true Chr05: 35993390-35997691 Glycine max
Glyma.05G169500 0.5kb upstream 0.5kb upstream 500 false Chr05: 35993390-35993889 Glycine max
Glyma.05G169500 0.5kb downstream 0.5kb downstream 4302 true Chr05: 35993890-35998191 Glycine max
Glyma.05G169500 0.5kb downstream 0.5kb downstream 500 false Chr05: 35997692-35998191 Glycine max
Glyma.05G169500 1.0kb upstream 1.0kb upstream 4802 true Chr05: 35992890-35997691 Glycine max
Glyma.05G169500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35992890-35993889 Glycine max
Glyma.05G169500 1.0kb downstream 1.0kb downstream 4802 true Chr05: 35993890-35998691 Glycine max
Glyma.05G169500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35997692-35998691 Glycine max
Glyma.05G169500 2.0kb upstream 2.0kb upstream 5802 true Chr05: 35991890-35997691 Glycine max
Glyma.05G169500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35991890-35993889 Glycine max
Glyma.05G169500 2.0kb downstream 2.0kb downstream 5802 true Chr05: 35993890-35999691 Glycine max
Glyma.05G169500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35997692-35999691 Glycine max
Glyma.05G169500 5.0kb upstream 5.0kb upstream 8802 true Chr05: 35988890-35997691 Glycine max
Glyma.05G169500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35988890-35993889 Glycine max
Glyma.05G169500 5.0kb downstream 5.0kb downstream 8802 true Chr05: 35993890-36002691 Glycine max
Glyma.05G169500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35997692-36002691 Glycine max
Glyma.05G169500 10.0kb upstream 10.0kb upstream 13802 true Chr05: 35983890-35997691 Glycine max
Glyma.05G169500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35983890-35993889 Glycine max
Glyma.05G169500 10.0kb downstream 10.0kb downstream 13802 true Chr05: 35993890-36007691 Glycine max
Glyma.05G169500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35997692-36007691 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312358 5265 Fabidae View MSA
124065325 5270 Rosid View MSA
123743210 5271 Pentapetalae View MSA
122786619 5272 Eudicot View MSA
122045643 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.66396 0.0 22.4594   Low
cufflinks 10.1051 0.0 28.6202    
cufflinks 5.84408 0.0 17.646   Low
cufflinks 13.4246 0.0 36.952    
cufflinks 13.7513 0.0 37.8717    
cufflinks 13.9774 0.0 38.4085    
cufflinks 16.9623 0.0 46.0164   High
cufflinks 12.7744 0.0 35.3368    
cufflinks 13.8987 0.0 38.2096    
cufflinks 4.452        
cufflinks 1.154       Low
cufflinks 3.525        
cufflinks 6.309       High
cufflinks 8.283     High High
cufflinks 1.466       Low
cufflinks 2.978        
cufflinks 1.694       Low
cufflinks 4.193        
cufflinks 4.311        
cufflinks 3.154        
cufflinks 1.792        
cufflinks 2.902        
cufflinks 3.405        
cufflinks 1.839        
cufflinks 2.726        
cufflinks 2.115        

0 Strain