Gene : Glyma.05G168500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10766//PTHR10766:SF52 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Genomic Order:  1685
Name:  ? Glyma.05G168500 Secondary Identifier:  ? PAC:30525974
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G168500 0.5kb upstream 0.5kb upstream 6335 true Chr05: 35893161-35899495 Glycine max
Glyma.05G168500 0.5kb upstream 0.5kb upstream 500 false Chr05: 35898996-35899495 Glycine max
Glyma.05G168500 0.5kb downstream 0.5kb downstream 6335 true Chr05: 35892661-35898995 Glycine max
Glyma.05G168500 0.5kb downstream 0.5kb downstream 500 false Chr05: 35892661-35893160 Glycine max
Glyma.05G168500 1.0kb upstream 1.0kb upstream 6835 true Chr05: 35893161-35899995 Glycine max
Glyma.05G168500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 35898996-35899995 Glycine max
Glyma.05G168500 1.0kb downstream 1.0kb downstream 6835 true Chr05: 35892161-35898995 Glycine max
Glyma.05G168500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 35892161-35893160 Glycine max
Glyma.05G168500 2.0kb upstream 2.0kb upstream 7835 true Chr05: 35893161-35900995 Glycine max
Glyma.05G168500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 35898996-35900995 Glycine max
Glyma.05G168500 2.0kb downstream 2.0kb downstream 7835 true Chr05: 35891161-35898995 Glycine max
Glyma.05G168500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 35891161-35893160 Glycine max
Glyma.05G168500 5.0kb upstream 5.0kb upstream 10835 true Chr05: 35893161-35903995 Glycine max
Glyma.05G168500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 35898996-35903995 Glycine max
Glyma.05G168500 5.0kb downstream 5.0kb downstream 10835 true Chr05: 35888161-35898995 Glycine max
Glyma.05G168500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 35888161-35893160 Glycine max
Glyma.05G168500 10.0kb upstream 10.0kb upstream 15835 true Chr05: 35893161-35908995 Glycine max
Glyma.05G168500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 35898996-35908995 Glycine max
Glyma.05G168500 10.0kb downstream 10.0kb downstream 15835 true Chr05: 35883161-35898995 Glycine max
Glyma.05G168500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 35883161-35893160 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311351 5265 Fabidae View MSA
124071508 5270 Rosid View MSA
123743269 5271 Pentapetalae View MSA
122792908 5272 Eudicot View MSA
122045723 5273 Angiosperm View MSA
121344967 5274 Embryophyte View MSA
123423887 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5738 0.0 28.4746   Low
cufflinks 29.5479 0.0 80.4087 High  
cufflinks 8.69813 0.0 23.5885   Low
cufflinks 42.1675 0.0 118.379 High  
cufflinks 45.5773 0.0 128.616 High  
cufflinks 30.5714 0.0 83.4105 High  
cufflinks 33.3853 0.0 91.4513 High  
cufflinks 41.4094 0.0 116.106 High  
cufflinks 27.2089 0.0 73.6734 High  
cufflinks 19.654     High High
cufflinks 1.759       Low
cufflinks 6.696        
cufflinks 19.647     High High
cufflinks 27.803     High High
cufflinks 2.67       Low
cufflinks 9.503     High  
cufflinks 5.654        
cufflinks 13.274     High  
cufflinks 15.576     High  
cufflinks 7.709     High  
cufflinks 4.187        
cufflinks 9.088     High  
cufflinks 11.294     High  
cufflinks 2.949       Low
cufflinks 8.989     High  
cufflinks 5.337        

0 Strain