Gene : Glyma.05G189600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22849//PTHR22849:SF20 - WDSAM1 PROTEIN Genomic Order:  1896
Name:  ? Glyma.05G189600 Secondary Identifier:  ? PAC:30526013
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G189600 0.5kb upstream 0.5kb upstream 2685 true Chr05: 37540710-37543394 Glycine max
Glyma.05G189600 0.5kb upstream 0.5kb upstream 500 false Chr05: 37540710-37541209 Glycine max
Glyma.05G189600 0.5kb downstream 0.5kb downstream 2685 true Chr05: 37541210-37543894 Glycine max
Glyma.05G189600 0.5kb downstream 0.5kb downstream 500 false Chr05: 37543395-37543894 Glycine max
Glyma.05G189600 1.0kb upstream 1.0kb upstream 3185 true Chr05: 37540210-37543394 Glycine max
Glyma.05G189600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37540210-37541209 Glycine max
Glyma.05G189600 1.0kb downstream 1.0kb downstream 3185 true Chr05: 37541210-37544394 Glycine max
Glyma.05G189600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37543395-37544394 Glycine max
Glyma.05G189600 2.0kb upstream 2.0kb upstream 4185 true Chr05: 37539210-37543394 Glycine max
Glyma.05G189600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37539210-37541209 Glycine max
Glyma.05G189600 2.0kb downstream 2.0kb downstream 4185 true Chr05: 37541210-37545394 Glycine max
Glyma.05G189600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37543395-37545394 Glycine max
Glyma.05G189600 5.0kb upstream 5.0kb upstream 7185 true Chr05: 37536210-37543394 Glycine max
Glyma.05G189600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37536210-37541209 Glycine max
Glyma.05G189600 5.0kb downstream 5.0kb downstream 7185 true Chr05: 37541210-37548394 Glycine max
Glyma.05G189600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37543395-37548394 Glycine max
Glyma.05G189600 10.0kb upstream 10.0kb upstream 12185 true Chr05: 37531210-37543394 Glycine max
Glyma.05G189600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37531210-37541209 Glycine max
Glyma.05G189600 10.0kb downstream 10.0kb downstream 12185 true Chr05: 37541210-37553394 Glycine max
Glyma.05G189600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37543395-37553394 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312368 5265 Fabidae View MSA
124071729 5270 Rosid View MSA
123744205 5271 Pentapetalae View MSA
122785881 5272 Eudicot View MSA
122041845 5273 Angiosperm View MSA
121351063 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.34647 0.0 20.1681   High
cufflinks 2.00093 0.0 6.46797    
cufflinks 4.40315 0.0 12.8263    
cufflinks 1.38237 0.0 4.68735   Low
cufflinks 3.62062 0.0 10.6853    
cufflinks 7.28996 0.0 20.0129   High
cufflinks 2.41465 0.0 7.58086    
cufflinks 5.68889 0.0 16.0027    
cufflinks 2.67027 0.0 8.26302    
cufflinks 1.693        
cufflinks 5.18        
cufflinks 2.039        
cufflinks 4.65        
cufflinks 2.233        
cufflinks 4.022        
cufflinks 1.109        
cufflinks 8.078     High High
cufflinks 0.614       Low
cufflinks 1.336        
cufflinks 0.735       Low
cufflinks 5.85     High High
cufflinks 1.398        
cufflinks 1.58        
cufflinks 8.22     High High
cufflinks 0.602       Low
cufflinks 7.299     High High

0 Strain