Gene : Glyma.05G190500 G. max Wm82.a2.v1
Defline:  (1 of 95) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  1905
Name:  ? Glyma.05G190500 Secondary Identifier:  ? PAC:30526795
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G190500 0.5kb upstream 0.5kb upstream 6833 true Chr05: 37611886-37618718 Glycine max
Glyma.05G190500 0.5kb upstream 0.5kb upstream 500 false Chr05: 37611886-37612385 Glycine max
Glyma.05G190500 0.5kb downstream 0.5kb downstream 6833 true Chr05: 37612386-37619218 Glycine max
Glyma.05G190500 0.5kb downstream 0.5kb downstream 500 false Chr05: 37618719-37619218 Glycine max
Glyma.05G190500 1.0kb upstream 1.0kb upstream 7333 true Chr05: 37611386-37618718 Glycine max
Glyma.05G190500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37611386-37612385 Glycine max
Glyma.05G190500 1.0kb downstream 1.0kb downstream 7333 true Chr05: 37612386-37619718 Glycine max
Glyma.05G190500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37618719-37619718 Glycine max
Glyma.05G190500 2.0kb upstream 2.0kb upstream 8333 true Chr05: 37610386-37618718 Glycine max
Glyma.05G190500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37610386-37612385 Glycine max
Glyma.05G190500 2.0kb downstream 2.0kb downstream 8333 true Chr05: 37612386-37620718 Glycine max
Glyma.05G190500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37618719-37620718 Glycine max
Glyma.05G190500 5.0kb upstream 5.0kb upstream 11333 true Chr05: 37607386-37618718 Glycine max
Glyma.05G190500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37607386-37612385 Glycine max
Glyma.05G190500 5.0kb downstream 5.0kb downstream 11333 true Chr05: 37612386-37623718 Glycine max
Glyma.05G190500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37618719-37623718 Glycine max
Glyma.05G190500 10.0kb upstream 10.0kb upstream 16333 true Chr05: 37602386-37618718 Glycine max
Glyma.05G190500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37602386-37612385 Glycine max
Glyma.05G190500 10.0kb downstream 10.0kb downstream 16333 true Chr05: 37612386-37628718 Glycine max
Glyma.05G190500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37618719-37628718 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239202 5265 Fabidae Singleton cluster - no MSA
123984478 5270 Rosid Singleton cluster - no MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0377773 0.0 0.155851 Low  
cufflinks 0.160626 0.0 0.624888 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.688467 0.0 2.50353   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain