Protein Family : expressed protein 122049503

Method ID:  5273 Method Name:  Angiosperm
Sequence Alignment:  View MSA Member Count:  217

217 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30054.t000016 (1 of 38) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) R. communis v0.1 3280   30054: 98908-102187
30138.t000130 (1 of 7) PF01805 - Surp module (Surp) R. communis v0.1 6772   30138: 933403-940174
Cucsa.046380 (1 of 40) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. sativus v1.0 7072   scaffold00542: 1885649-1892720
Cucsa.101030 (1 of 40) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. sativus v1.0 13032   scaffold00927: 292279-305310
Cucsa.198330 (1 of 6) PF01805 - Surp module (Surp) C. sativus v1.0 7824   scaffold01357: 1409190-1417013
orange1.1g003507m.g (1 of 37) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. sinensis v1.1 4142   scaffold00007: 122452-126593
orange1.1g043773m.g   C. sinensis v1.1 3777   scaffold00078: 318139-321915
orange1.1g000480m.g (1 of 7) PF01805 - Surp module (Surp) C. sinensis v1.1 7525   scaffold00030: 901143-908667
AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein A. thaliana TAIR10 3250   Chr3: 6413301-6416550
AT2G33835 (1 of 50) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) A. thaliana TAIR10 FES1 2914   Chr2: 14311787-14314700
Thhalv10016429m.g (1 of 50) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) E. salsugineum v1.0 3762   scaffold_10: 7516664-7520425
Thhalv10020512m.g   E. salsugineum v1.0 2399   scaffold_13: 2861338-2863736
Ciclev10018493m.g (1 of 7) PF01805 - Surp module (Surp) C. clementina v1.0 7318   scaffold_3: 8309803-8317120
Ciclev10014553m.g (1 of 39) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. clementina v1.0 2715   scaffold_2: 33632158-33634872
Lus10025447.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 2938   scaffold46: 720813-723750
Lus10002082.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 4379   scaffold575: 5302-9680
Lus10033487.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 3438   scaffold701: 210774-214211
Lus10003846.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 2259   scaffold706: 2251-4509
Lus10020889.g   L. usitatissimum v1.0 3537   scaffold711: 444370-447906
Lus10015319.g   L. usitatissimum v1.0 2899   scaffold924: 476063-478961
Gorai.003G068000 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 9022   Chr03: 14290666-14299687
Gorai.003G101900 (1 of 8) PF01805 - Surp module (Surp) G. raimondii v2.1 7655   Chr03: 31180248-31187902
Gorai.005G122500 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 5104   Chr05: 26524842-26529945
Gorai.009G167600 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 4893   Chr09: 12878947-12883839
Gorai.010G256500 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 6120   Chr10: 62131835-62137954
Thecc1EG001432 (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) T. cacao v1.1 8613   scaffold_1: 7124736-7133348
Thecc1EG014295 (1 of 7) PF01805 - Surp module (Surp) T. cacao v1.1 12907   scaffold_3: 21382457-21395363
Thecc1EG029826 (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) T. cacao v1.1 7323   scaffold_6: 24500422-24507744
Migut.I00513 (1 of 5) KOG0106 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) M. guttatus v2.0 5427   scaffold_9: 10762192-10767618
Migut.M01119 (1 of 51) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) M. guttatus v2.0 10057   scaffold_13: 17009188-17019244

217 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30054.m000801 R. communis v0.1 122049503 expressed protein 2 5273 Angiosperm
Cucsa.101030.1 C. sativus v1.0 122049503 expressed protein 3 5273 Angiosperm
orange1.1g000480m C. sinensis v1.1 122049503 expressed protein 3 5273 Angiosperm
Ciclev10014553m C. clementina v1.0 122049503 expressed protein 2 5273 Angiosperm
Lus10025447 L. usitatissimum v1.0 122049503 expressed protein 6 5273 Angiosperm
Lus10003846 L. usitatissimum v1.0 122049503 expressed protein 6 5273 Angiosperm
Gorai.003G101900.1 G. raimondii v2.1 122049503 expressed protein 5 5273 Angiosperm
Thecc1EG029826t2 T. cacao v1.1 122049503 expressed protein 3 5273 Angiosperm
Migut.N03235.1.p M. guttatus v2.0 122049503 expressed protein 4 5273 Angiosperm
Migut.M01119.1.p M. guttatus v2.0 122049503 expressed protein 4 5273 Angiosperm
Glyma.15G076800.1.p G. max Wm82.a2.v1 122049503 expressed protein 7 5273 Angiosperm
Glyma.06G204600.1.p G. max Wm82.a2.v1 122049503 expressed protein 7 5273 Angiosperm
Brara.E01024.1.p B. rapa FPsc v1.3 122049503 expressed protein 4 5273 Angiosperm
Bostr.26675s0284.1.p B. stricta v1.2 122049503 expressed protein 3 5273 Angiosperm
Medtr3g095960.5 M. truncatula Mt4.0v1 122049503 expressed protein 4 5273 Angiosperm
SapurV1A.0086s0520.1.p S. purpurea v1.0 122049503 expressed protein 6 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00154.56 A. trichopoda v1.0 122049503 expressed protein 3 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00004.258 A. trichopoda v1.0 122049503 expressed protein 3 5273 Angiosperm
evm_27.model.AmTr_v1.0_scaffold00071.85 A. trichopoda v1.0 122049503 expressed protein 3 5273 Angiosperm
Traes_6BL_2801119FA.4 T. aestivum v2.2 122049503 expressed protein 6 5273 Angiosperm
Traes_6AL_AA5E171CD.1 T. aestivum v2.2 122049503 expressed protein 6 5273 Angiosperm
Traes_2BL_4281689C9.3 T. aestivum v2.2 122049503 expressed protein 6 5273 Angiosperm
Traes_6DL_0A41F917E.1 T. aestivum v2.2 122049503 expressed protein 6 5273 Angiosperm
Traes_2AL_07E23D33F.1 T. aestivum v2.2 122049503 expressed protein 6 5273 Angiosperm
Traes_2DL_F4640A08C.1 T. aestivum v2.2 122049503 expressed protein 6 5273 Angiosperm
Eucgr.E03255.1.p E. grandis v2.0 122049503 expressed protein 3 5273 Angiosperm
Eucgr.B00614.1.p E. grandis v2.0 122049503 expressed protein 3 5273 Angiosperm
Prupe.6G159100.1.p P. persica v2.1 122049503 expressed protein 3 5273 Angiosperm
Prupe.4G051000.1.p P. persica v2.1 122049503 expressed protein 3 5273 Angiosperm
Prupe.5G206700.1.p P. persica v2.1 122049503 expressed protein 3 5273 Angiosperm