Gene : Thecc1EG001432 T. cacao v1.1
Defline:  (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  1231
Name:  ? Thecc1EG001432 Secondary Identifier:  ? PAC:27436870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001432 0.5kb upstream 0.5kb upstream 9113 true scaffold_1: 7124236-7133348 Theobroma cacao
Thecc1EG001432 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 7124236-7124735 Theobroma cacao
Thecc1EG001432 0.5kb downstream 0.5kb downstream 9113 true scaffold_1: 7124736-7133848 Theobroma cacao
Thecc1EG001432 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 7133349-7133848 Theobroma cacao
Thecc1EG001432 1.0kb upstream 1.0kb upstream 9613 true scaffold_1: 7123736-7133348 Theobroma cacao
Thecc1EG001432 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 7123736-7124735 Theobroma cacao
Thecc1EG001432 1.0kb downstream 1.0kb downstream 9613 true scaffold_1: 7124736-7134348 Theobroma cacao
Thecc1EG001432 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 7133349-7134348 Theobroma cacao
Thecc1EG001432 2.0kb upstream 2.0kb upstream 10613 true scaffold_1: 7122736-7133348 Theobroma cacao
Thecc1EG001432 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 7122736-7124735 Theobroma cacao
Thecc1EG001432 2.0kb downstream 2.0kb downstream 10613 true scaffold_1: 7124736-7135348 Theobroma cacao
Thecc1EG001432 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 7133349-7135348 Theobroma cacao
Thecc1EG001432 5.0kb upstream 5.0kb upstream 13613 true scaffold_1: 7119736-7133348 Theobroma cacao
Thecc1EG001432 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 7119736-7124735 Theobroma cacao
Thecc1EG001432 5.0kb downstream 5.0kb downstream 13613 true scaffold_1: 7124736-7138348 Theobroma cacao
Thecc1EG001432 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 7133349-7138348 Theobroma cacao
Thecc1EG001432 10.0kb upstream 10.0kb upstream 18613 true scaffold_1: 7114736-7133348 Theobroma cacao
Thecc1EG001432 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 7114736-7124735 Theobroma cacao
Thecc1EG001432 10.0kb downstream 10.0kb downstream 18613 true scaffold_1: 7124736-7143348 Theobroma cacao
Thecc1EG001432 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 7133349-7143348 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123830594 5264 Brassicales-Malvales View MSA
124321684 5266 SBM View MSA
124253098 5268 Malvidae View MSA
124063486 5270 Rosid View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain