Protein Family : Zinc finger C-x8-C-x5-C-x3-H type family protein 124063486

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  46

46 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30054.t000016 (1 of 38) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) R. communis v0.1 3280   30054: 98908-102187
Cucsa.101030 (1 of 40) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) C. sativus v1.0 13032   scaffold00927: 292279-305310
orange1.1g043773m.g   C. sinensis v1.1 3777   scaffold00078: 318139-321915
AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein A. thaliana TAIR10 3250   Chr3: 6413301-6416550
Thhalv10020512m.g   E. salsugineum v1.0 2399   scaffold_13: 2861338-2863736
Lus10002082.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 4379   scaffold575: 5302-9680
Lus10033487.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 3438   scaffold701: 210774-214211
Lus10003846.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 2259   scaffold706: 2251-4509
Lus10020889.g   L. usitatissimum v1.0 3537   scaffold711: 444370-447906
Gorai.003G068000 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 9022   Chr03: 14290666-14299687
Gorai.005G122500 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 5104   Chr05: 26524842-26529945
Thecc1EG001432 (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) T. cacao v1.1 8613   scaffold_1: 7124736-7133348
Araha.13956s0002   A. halleri v1.1 3574   Scaffold13956: 4852-8425
Araha.15805s0006   A. halleri v1.1 3259   Scaffold15805: 15919-19177
Cagra.0932s0013   C. grandiflora v1.1 2847   Scaffold932: 44906-47752
Cagra.1681s0032   C. grandiflora v1.1 3050   Scaffold1681: 114502-117551
Glyma.06G152200 (1 of 95) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. max Wm82.a2.v1 9507   Chr06: 12389623-12399129
Glyma.04G214200 (1 of 95) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. max Wm82.a2.v1 6643   Chr04: 48588602-48595244
Brara.A02919   B. rapa FPsc v1.3 3126   A01: 24902005-24905130
Brara.F00399   B. rapa FPsc v1.3 2873   A06: 2389262-2392134
Bostr.19424s0798   B. stricta v1.2 3380   Scaffold19424: 6014654-6018033
Bostr.26675s0284 (1 of 51) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) B. stricta v1.2 3701   Scaffold26675: 1796100-1799800
Medtr3g095960 (1 of 52) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) M. truncatula Mt4.0v1 8482   chr3: 43848041-43856522
Medtr8g093480   M. truncatula Mt4.0v1 9353   chr8: 39048437-39057789
SapurV1A.0916s0020 zinc finger CCCH domain protein, putative S. purpurea v1.0 6935   chr05: 3110413-3117347
SapurV1A.2745s0010 zinc finger C-x8-C-x5-C-x3-H type protein S. purpurea v1.0 5825   Scaffold2745: 1-5825
SapurV1A.1428s0120 zinc finger C-x8-C-x5-C-x3-H type protein S. purpurea v1.0 2177   chr07: 12580831-12583007
Eucgr.I00225 (1 of 8) KOG1677 - CCCH-type Zn-finger protein E. grandis v2.0 6140   Chr09: 4628641-4634780
Prupe.6G159100 (1 of 50) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) P. persica v2.1 9897   Pp06: 14544215-14554111
Manes.12G153500 (1 of 58) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) M. esculenta v6.1 8145   Chromosome12: 31082658-31090802

46 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30054.m000801 R. communis v0.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5270 Rosid
Cucsa.101030.1 C. sativus v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5270 Rosid
Lus10003846 L. usitatissimum v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 4 5270 Rosid
Bostr.26675s0284.1.p B. stricta v1.2 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Medtr3g095960.5 M. truncatula Mt4.0v1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Phvul.009G149100.1.p P. vulgaris v2.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5270 Rosid
Podel.07G115100.1.p P. deltoides WV94 v2.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
VIT_218s0001g15570.4 V. vinifera v2.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5270 Rosid
Ca_09666 C. arietinum v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Ca_04178 C. arietinum v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
orange1.1g043773m C. sinensis v1.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5270 Rosid
AT3G18640.1 A. thaliana TAIR10 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5270 Rosid
Thhalv10020512m E. salsugineum v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5270 Rosid
Lus10033487 L. usitatissimum v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 4 5270 Rosid
Lus10002082 L. usitatissimum v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 4 5270 Rosid
Lus10020889 L. usitatissimum v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 4 5270 Rosid
Gorai.005G122500.1 G. raimondii v2.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Gorai.003G068000.1 G. raimondii v2.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Thecc1EG001432t2 T. cacao v1.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5270 Rosid
Araha.15805s0006.1.p A. halleri v1.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Araha.13956s0002.1.p A. halleri v1.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Cagra.1681s0032.1.p C. grandiflora v1.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Cagra.0932s0013.1.p C. grandiflora v1.1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Glyma.06G152200.1.p G. max Wm82.a2.v1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Glyma.04G214200.1.p G. max Wm82.a2.v1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Brara.F00399.1.p B. rapa FPsc v1.3 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Brara.A02919.1.p B. rapa FPsc v1.3 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Bostr.19424s0798.1.p B. stricta v1.2 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
Medtr8g093480.2 M. truncatula Mt4.0v1 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5270 Rosid
SapurV1A.0916s0020.1.p S. purpurea v1.0 124063486 Zinc finger C-x8-C-x5-C-x3-H type family protein 3 5270 Rosid