Gene : AT3G18640 A. thaliana TAIR10
Defline:  Zinc finger C-x8-C-x5-C-x3-H type family protein Genomic Order:  1930
Name:  ? AT3G18640 Secondary Identifier:  ? PAC:19658470
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18640 0.5kb upstream 0.5kb upstream 3750 true Chr3: 6413301-6417050 Arabidopsis thaliana
AT3G18640 0.5kb upstream 0.5kb upstream 500 false Chr3: 6416551-6417050 Arabidopsis thaliana
AT3G18640 0.5kb downstream 0.5kb downstream 3750 true Chr3: 6412801-6416550 Arabidopsis thaliana
AT3G18640 0.5kb downstream 0.5kb downstream 500 false Chr3: 6412801-6413300 Arabidopsis thaliana
AT3G18640 1.0kb upstream 1.0kb upstream 4250 true Chr3: 6413301-6417550 Arabidopsis thaliana
AT3G18640 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6416551-6417550 Arabidopsis thaliana
AT3G18640 1.0kb downstream 1.0kb downstream 4250 true Chr3: 6412301-6416550 Arabidopsis thaliana
AT3G18640 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6412301-6413300 Arabidopsis thaliana
AT3G18640 2.0kb upstream 2.0kb upstream 5250 true Chr3: 6413301-6418550 Arabidopsis thaliana
AT3G18640 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6416551-6418550 Arabidopsis thaliana
AT3G18640 2.0kb downstream 2.0kb downstream 5250 true Chr3: 6411301-6416550 Arabidopsis thaliana
AT3G18640 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6411301-6413300 Arabidopsis thaliana
AT3G18640 5.0kb upstream 5.0kb upstream 8250 true Chr3: 6413301-6421550 Arabidopsis thaliana
AT3G18640 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6416551-6421550 Arabidopsis thaliana
AT3G18640 5.0kb downstream 5.0kb downstream 8250 true Chr3: 6408301-6416550 Arabidopsis thaliana
AT3G18640 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6408301-6413300 Arabidopsis thaliana
AT3G18640 10.0kb upstream 10.0kb upstream 13250 true Chr3: 6413301-6426550 Arabidopsis thaliana
AT3G18640 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6416551-6426550 Arabidopsis thaliana
AT3G18640 10.0kb downstream 10.0kb downstream 13250 true Chr3: 6403301-6416550 Arabidopsis thaliana
AT3G18640 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6403301-6413300 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370104 5261 Brassicaceae View MSA
123799899 5264 Brassicales-Malvales View MSA
124297371 5266 SBM View MSA
124253098 5268 Malvidae View MSA
124063486 5270 Rosid View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.152        
cufflinks 11.816        
cufflinks 10.023        
cufflinks 13.387        
cufflinks 9.343       Low
cufflinks 14.423        

0 Strain