Protein Family : Zinc finger C-x8-C-x5-C-x3-H type family protein 124253098

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  31

31 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30054.t000016 (1 of 38) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) R. communis v0.1 3280   30054: 98908-102187
orange1.1g043773m.g   C. sinensis v1.1 3777   scaffold00078: 318139-321915
AT3G18640 Zinc finger C-x8-C-x5-C-x3-H type family protein A. thaliana TAIR10 3250   Chr3: 6413301-6416550
Thhalv10020512m.g   E. salsugineum v1.0 2399   scaffold_13: 2861338-2863736
Lus10002082.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 4379   scaffold575: 5302-9680
Lus10033487.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 3438   scaffold701: 210774-214211
Lus10003846.g (1 of 67) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) L. usitatissimum v1.0 2259   scaffold706: 2251-4509
Lus10020889.g   L. usitatissimum v1.0 3537   scaffold711: 444370-447906
Gorai.003G068000 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 9022   Chr03: 14290666-14299687
Gorai.005G122500 (1 of 75) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) G. raimondii v2.1 5104   Chr05: 26524842-26529945
Thecc1EG001432 (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) T. cacao v1.1 8613   scaffold_1: 7124736-7133348
Araha.13956s0002   A. halleri v1.1 3574   Scaffold13956: 4852-8425
Araha.15805s0006   A. halleri v1.1 3259   Scaffold15805: 15919-19177
Cagra.0932s0013   C. grandiflora v1.1 2847   Scaffold932: 44906-47752
Cagra.1681s0032   C. grandiflora v1.1 3050   Scaffold1681: 114502-117551
Brara.A02919   B. rapa FPsc v1.3 3126   A01: 24902005-24905130
Brara.F00399   B. rapa FPsc v1.3 2873   A06: 2389262-2392134
Bostr.19424s0798   B. stricta v1.2 3380   Scaffold19424: 6014654-6018033
Bostr.26675s0284 (1 of 51) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) B. stricta v1.2 3701   Scaffold26675: 1796100-1799800
SapurV1A.0916s0020 zinc finger CCCH domain protein, putative S. purpurea v1.0 6935   chr05: 3110413-3117347
SapurV1A.2745s0010 zinc finger C-x8-C-x5-C-x3-H type protein S. purpurea v1.0 5825   Scaffold2745: 1-5825
SapurV1A.1428s0120 zinc finger C-x8-C-x5-C-x3-H type protein S. purpurea v1.0 2177   chr07: 12580831-12583007
Manes.12G153500 (1 of 58) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) M. esculenta v6.1 8145   Chromosome12: 31082658-31090802
AL1G55670   A. lyrata v2.1 3295   scaffold_1: 24942880-24946174
AL3G31950   A. lyrata v2.1 3183   scaffold_3: 7995705-7998887
Potri.005G061100   P. trichocarpa v3.1 9309   Chr05: 4287303-4296611
Potri.007G107800   P. trichocarpa v3.1 7652   Chr07: 13143437-13151088
Podel.07G115100   P. deltoides WV94 v2.1 7555   Chr07: 13461717-13469271
Podel.05G066600   P. deltoides WV94 v2.1 9408   Chr05: 4444724-4454131
Carub.0001s3802   C. rubella v1.1 3622   scaffold_1: 16762089-16765710

31 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30054.m000801 R. communis v0.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5268 Malvidae
Lus10003846 L. usitatissimum v1.0 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 4 5268 Malvidae
Bostr.26675s0284.1.p B. stricta v1.2 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Podel.07G115100.1.p P. deltoides WV94 v2.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
orange1.1g043773m C. sinensis v1.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5268 Malvidae
AT3G18640.1 A. thaliana TAIR10 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5268 Malvidae
Thhalv10020512m E. salsugineum v1.0 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5268 Malvidae
Lus10020889 L. usitatissimum v1.0 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 4 5268 Malvidae
Lus10033487 L. usitatissimum v1.0 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 4 5268 Malvidae
Lus10002082 L. usitatissimum v1.0 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 4 5268 Malvidae
Gorai.003G068000.1 G. raimondii v2.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Gorai.005G122500.1 G. raimondii v2.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Thecc1EG001432t2 T. cacao v1.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5268 Malvidae
Araha.13956s0002.1.p A. halleri v1.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Araha.15805s0006.1.p A. halleri v1.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Cagra.0932s0013.1.p C. grandiflora v1.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Cagra.1681s0032.1.p C. grandiflora v1.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Brara.F00399.1.p B. rapa FPsc v1.3 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Brara.A02919.1.p B. rapa FPsc v1.3 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Bostr.19424s0798.1.p B. stricta v1.2 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
SapurV1A.0916s0020.1.p S. purpurea v1.0 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 3 5268 Malvidae
SapurV1A.1428s0120.1.p S. purpurea v1.0 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 3 5268 Malvidae
SapurV1A.2745s0010.1.p S. purpurea v1.0 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 3 5268 Malvidae
Manes.12G153500.1.p M. esculenta v6.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 1 5268 Malvidae
AL3G31950.t1 A. lyrata v2.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
AL1G55670.t1 A. lyrata v2.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Potri.005G061100.2.p P. trichocarpa v3.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Potri.007G107800.1.p P. trichocarpa v3.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Podel.05G066600.1.p P. deltoides WV94 v2.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae
Carub.0001s3802.1.p C. rubella v1.1 124253098 Zinc finger C-x8-C-x5-C-x3-H type family protein 2 5268 Malvidae