Gene : Eucgr.I00225 E. grandis v2.0
Defline:  (1 of 8) KOG1677 - CCCH-type Zn-finger protein Genomic Order:  174
Name:  ? Eucgr.I00225 Secondary Identifier:  ? PAC:32063833
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00225 0.5kb upstream 0.5kb upstream 6640 true Chr09: 4628641-4635280 Eucalyptus grandis
Eucgr.I00225 0.5kb upstream 0.5kb upstream 500 false Chr09: 4634781-4635280 Eucalyptus grandis
Eucgr.I00225 0.5kb downstream 0.5kb downstream 6640 true Chr09: 4628141-4634780 Eucalyptus grandis
Eucgr.I00225 0.5kb downstream 0.5kb downstream 500 false Chr09: 4628141-4628640 Eucalyptus grandis
Eucgr.I00225 1.0kb upstream 1.0kb upstream 7140 true Chr09: 4628641-4635780 Eucalyptus grandis
Eucgr.I00225 1.0kb upstream 1.0kb upstream 1000 false Chr09: 4634781-4635780 Eucalyptus grandis
Eucgr.I00225 1.0kb downstream 1.0kb downstream 7140 true Chr09: 4627641-4634780 Eucalyptus grandis
Eucgr.I00225 1.0kb downstream 1.0kb downstream 1000 false Chr09: 4627641-4628640 Eucalyptus grandis
Eucgr.I00225 2.0kb upstream 2.0kb upstream 8140 true Chr09: 4628641-4636780 Eucalyptus grandis
Eucgr.I00225 2.0kb upstream 2.0kb upstream 2000 false Chr09: 4634781-4636780 Eucalyptus grandis
Eucgr.I00225 2.0kb downstream 2.0kb downstream 8140 true Chr09: 4626641-4634780 Eucalyptus grandis
Eucgr.I00225 2.0kb downstream 2.0kb downstream 2000 false Chr09: 4626641-4628640 Eucalyptus grandis
Eucgr.I00225 5.0kb upstream 5.0kb upstream 11140 true Chr09: 4628641-4639780 Eucalyptus grandis
Eucgr.I00225 5.0kb upstream 5.0kb upstream 5000 false Chr09: 4634781-4639780 Eucalyptus grandis
Eucgr.I00225 5.0kb downstream 5.0kb downstream 11140 true Chr09: 4623641-4634780 Eucalyptus grandis
Eucgr.I00225 5.0kb downstream 5.0kb downstream 5000 false Chr09: 4623641-4628640 Eucalyptus grandis
Eucgr.I00225 10.0kb upstream 10.0kb upstream 16140 true Chr09: 4628641-4644780 Eucalyptus grandis
Eucgr.I00225 10.0kb upstream 10.0kb upstream 10000 false Chr09: 4634781-4644780 Eucalyptus grandis
Eucgr.I00225 10.0kb downstream 10.0kb downstream 16140 true Chr09: 4618641-4634780 Eucalyptus grandis
Eucgr.I00225 10.0kb downstream 10.0kb downstream 10000 false Chr09: 4618641-4628640 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063486 5270 Rosid View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.29429 0.0 16.364    
cufflinks 10.9018 0.0 24.1505   High
cufflinks 9.32981 0.0 20.7254    
cufflinks 7.04187 0.0 15.763    
cufflinks 6.03697 0.0 13.6496   Low
cufflinks 8.19092 0.0 18.3182    

0 Strain