Gene : Glyma.06G152200 G. max Wm82.a2.v1
Defline:  (1 of 95) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  1522
Name:  ? Glyma.06G152200 Secondary Identifier:  ? PAC:30550820
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G152200 0.5kb upstream 0.5kb upstream 10007 true Chr06: 12389123-12399129 Glycine max
Glyma.06G152200 0.5kb upstream 0.5kb upstream 500 false Chr06: 12389123-12389622 Glycine max
Glyma.06G152200 0.5kb downstream 0.5kb downstream 10007 true Chr06: 12389623-12399629 Glycine max
Glyma.06G152200 0.5kb downstream 0.5kb downstream 500 false Chr06: 12399130-12399629 Glycine max
Glyma.06G152200 1.0kb upstream 1.0kb upstream 10507 true Chr06: 12388623-12399129 Glycine max
Glyma.06G152200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12388623-12389622 Glycine max
Glyma.06G152200 1.0kb downstream 1.0kb downstream 10507 true Chr06: 12389623-12400129 Glycine max
Glyma.06G152200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12399130-12400129 Glycine max
Glyma.06G152200 2.0kb upstream 2.0kb upstream 11507 true Chr06: 12387623-12399129 Glycine max
Glyma.06G152200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12387623-12389622 Glycine max
Glyma.06G152200 2.0kb downstream 2.0kb downstream 11507 true Chr06: 12389623-12401129 Glycine max
Glyma.06G152200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12399130-12401129 Glycine max
Glyma.06G152200 5.0kb upstream 5.0kb upstream 14507 true Chr06: 12384623-12399129 Glycine max
Glyma.06G152200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12384623-12389622 Glycine max
Glyma.06G152200 5.0kb downstream 5.0kb downstream 14507 true Chr06: 12389623-12404129 Glycine max
Glyma.06G152200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12399130-12404129 Glycine max
Glyma.06G152200 10.0kb upstream 10.0kb upstream 19507 true Chr06: 12379623-12399129 Glycine max
Glyma.06G152200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12379623-12389622 Glycine max
Glyma.06G152200 10.0kb downstream 10.0kb downstream 19507 true Chr06: 12389623-12409129 Glycine max
Glyma.06G152200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12399130-12409129 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311130 5265 Fabidae View MSA
124063486 5270 Rosid View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3325 0.0 40.4907   High
cufflinks 10.1112 0.0 35.8137    
cufflinks 9.61688 0.0 35.5401    
cufflinks 7.75043 0.0 26.914    
cufflinks 5.14431 0.0 18.2733   Low
cufflinks 4.15944 0.0 15.207   Low
cufflinks 7.21424 0.0 24.6683    
cufflinks 7.9067 0.0 27.6181    
cufflinks 6.61583 0.0 22.9373    
cufflinks 1.131        
cufflinks 0.836        
cufflinks 2.404        
cufflinks 0.952        
cufflinks 0.973        
cufflinks 1.396        
cufflinks 2.746        
cufflinks 0.67       Low
cufflinks 2.784        
cufflinks 1.756        
cufflinks 3.944       High
cufflinks 0.82       Low
cufflinks 3.789       High
cufflinks 3.335       High
cufflinks 0.972        
cufflinks 3.419       High
cufflinks 0.692       Low

0 Strain