Gene : Thecc1EG029826 T. cacao v1.1
Defline:  (1 of 44) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  1790
Name:  ? Thecc1EG029826 Secondary Identifier:  ? PAC:27440906
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG029826 0.5kb upstream 0.5kb upstream 7823 true scaffold_6: 24499922-24507744 Theobroma cacao
Thecc1EG029826 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 24499922-24500421 Theobroma cacao
Thecc1EG029826 0.5kb downstream 0.5kb downstream 7823 true scaffold_6: 24500422-24508244 Theobroma cacao
Thecc1EG029826 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 24507745-24508244 Theobroma cacao
Thecc1EG029826 1.0kb upstream 1.0kb upstream 8323 true scaffold_6: 24499422-24507744 Theobroma cacao
Thecc1EG029826 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 24499422-24500421 Theobroma cacao
Thecc1EG029826 1.0kb downstream 1.0kb downstream 8323 true scaffold_6: 24500422-24508744 Theobroma cacao
Thecc1EG029826 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 24507745-24508744 Theobroma cacao
Thecc1EG029826 2.0kb upstream 2.0kb upstream 9323 true scaffold_6: 24498422-24507744 Theobroma cacao
Thecc1EG029826 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 24498422-24500421 Theobroma cacao
Thecc1EG029826 2.0kb downstream 2.0kb downstream 9323 true scaffold_6: 24500422-24509744 Theobroma cacao
Thecc1EG029826 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 24507745-24509744 Theobroma cacao
Thecc1EG029826 5.0kb upstream 5.0kb upstream 12323 true scaffold_6: 24495422-24507744 Theobroma cacao
Thecc1EG029826 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 24495422-24500421 Theobroma cacao
Thecc1EG029826 5.0kb downstream 5.0kb downstream 12323 true scaffold_6: 24500422-24512744 Theobroma cacao
Thecc1EG029826 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 24507745-24512744 Theobroma cacao
Thecc1EG029826 10.0kb upstream 10.0kb upstream 17323 true scaffold_6: 24490422-24507744 Theobroma cacao
Thecc1EG029826 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 24490422-24500421 Theobroma cacao
Thecc1EG029826 10.0kb downstream 10.0kb downstream 17323 true scaffold_6: 24500422-24517744 Theobroma cacao
Thecc1EG029826 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 24507745-24517744 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831093 5264 Brassicales-Malvales View MSA
124351291 5266 SBM View MSA
124244409 5268 Malvidae View MSA
124062479 5270 Rosid View MSA
123743677 5271 Pentapetalae View MSA
122786281 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain