Gene : Glyma.05G192100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22849//PTHR22849:SF34 - WDSAM1 PROTEIN Genomic Order:  1921
Name:  ? Glyma.05G192100 Secondary Identifier:  ? PAC:30523598
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G192100 0.5kb upstream 0.5kb upstream 1657 true Chr05: 37758329-37759985 Glycine max
Glyma.05G192100 0.5kb upstream 0.5kb upstream 500 false Chr05: 37759486-37759985 Glycine max
Glyma.05G192100 0.5kb downstream 0.5kb downstream 1657 true Chr05: 37757829-37759485 Glycine max
Glyma.05G192100 0.5kb downstream 0.5kb downstream 500 false Chr05: 37757829-37758328 Glycine max
Glyma.05G192100 1.0kb upstream 1.0kb upstream 2157 true Chr05: 37758329-37760485 Glycine max
Glyma.05G192100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37759486-37760485 Glycine max
Glyma.05G192100 1.0kb downstream 1.0kb downstream 2157 true Chr05: 37757329-37759485 Glycine max
Glyma.05G192100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37757329-37758328 Glycine max
Glyma.05G192100 2.0kb upstream 2.0kb upstream 3157 true Chr05: 37758329-37761485 Glycine max
Glyma.05G192100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37759486-37761485 Glycine max
Glyma.05G192100 2.0kb downstream 2.0kb downstream 3157 true Chr05: 37756329-37759485 Glycine max
Glyma.05G192100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37756329-37758328 Glycine max
Glyma.05G192100 5.0kb upstream 5.0kb upstream 6157 true Chr05: 37758329-37764485 Glycine max
Glyma.05G192100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37759486-37764485 Glycine max
Glyma.05G192100 5.0kb downstream 5.0kb downstream 6157 true Chr05: 37753329-37759485 Glycine max
Glyma.05G192100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37753329-37758328 Glycine max
Glyma.05G192100 10.0kb upstream 10.0kb upstream 11157 true Chr05: 37758329-37769485 Glycine max
Glyma.05G192100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37759486-37769485 Glycine max
Glyma.05G192100 10.0kb downstream 10.0kb downstream 11157 true Chr05: 37748329-37759485 Glycine max
Glyma.05G192100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37748329-37758328 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254058 5265 Fabidae View MSA
124070063 5270 Rosid View MSA
123742248 5271 Pentapetalae View MSA
122794681 5272 Eudicot View MSA
122048666 5273 Angiosperm View MSA
121311065 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.957248 0.0 3.54073   High
cufflinks 0.614165 0.0 2.31775    
cufflinks 0.390412 0.0 1.5012    
cufflinks 0.0883952 0.0 0.36099 Low  
cufflinks 0.0607121 0.0 0.254071 Low  
cufflinks 0.975689 0.0 3.60446   High
cufflinks 0.0632157 0.0 0.263963 Low  
cufflinks 0.113597 0.0 0.458259 Low  
cufflinks 0.0466213 0.0 0.198693 Low Low
cufflinks 0.179        
cufflinks 0.081        
cufflinks 0.253        
cufflinks 0.099        
cufflinks 0.11        
cufflinks 0.048     Low Low
cufflinks 0.114        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.042     Low Low
cufflinks 0.469       High
cufflinks 0.109        
cufflinks 0.121        
cufflinks 0.373       High
cufflinks 0.223        
cufflinks 0.132        
cufflinks 0.201        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain