Gene : Glyma.05G193000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13533:SF5 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 14-RELATED Genomic Order:  1930
Name:  ? Glyma.05G193000 Secondary Identifier:  ? PAC:30526090
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G193000 0.5kb upstream 0.5kb upstream 5448 true Chr05: 37811081-37816528 Glycine max
Glyma.05G193000 0.5kb upstream 0.5kb upstream 500 false Chr05: 37816029-37816528 Glycine max
Glyma.05G193000 0.5kb downstream 0.5kb downstream 5448 true Chr05: 37810581-37816028 Glycine max
Glyma.05G193000 0.5kb downstream 0.5kb downstream 500 false Chr05: 37810581-37811080 Glycine max
Glyma.05G193000 1.0kb upstream 1.0kb upstream 5948 true Chr05: 37811081-37817028 Glycine max
Glyma.05G193000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 37816029-37817028 Glycine max
Glyma.05G193000 1.0kb downstream 1.0kb downstream 5948 true Chr05: 37810081-37816028 Glycine max
Glyma.05G193000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 37810081-37811080 Glycine max
Glyma.05G193000 2.0kb upstream 2.0kb upstream 6948 true Chr05: 37811081-37818028 Glycine max
Glyma.05G193000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 37816029-37818028 Glycine max
Glyma.05G193000 2.0kb downstream 2.0kb downstream 6948 true Chr05: 37809081-37816028 Glycine max
Glyma.05G193000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 37809081-37811080 Glycine max
Glyma.05G193000 5.0kb upstream 5.0kb upstream 9948 true Chr05: 37811081-37821028 Glycine max
Glyma.05G193000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 37816029-37821028 Glycine max
Glyma.05G193000 5.0kb downstream 5.0kb downstream 9948 true Chr05: 37806081-37816028 Glycine max
Glyma.05G193000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 37806081-37811080 Glycine max
Glyma.05G193000 10.0kb upstream 10.0kb upstream 14948 true Chr05: 37811081-37826028 Glycine max
Glyma.05G193000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 37816029-37826028 Glycine max
Glyma.05G193000 10.0kb downstream 10.0kb downstream 14948 true Chr05: 37801081-37816028 Glycine max
Glyma.05G193000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 37801081-37811080 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310420 5265 Fabidae View MSA
124073256 5270 Rosid View MSA
123736665 5271 Pentapetalae View MSA
122795116 5272 Eudicot View MSA
122045954 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121351071 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.98089 0.0 11.3528    
cufflinks 3.50048 0.0 10.1512   Low
cufflinks 4.85855 0.0 13.5333    
cufflinks 5.67128 0.0 15.6069    
cufflinks 4.55091 0.0 12.8052    
cufflinks 14.4943 0.0 38.7064   High
cufflinks 6.13233 0.0 16.8087    
cufflinks 6.15562 0.0 16.8511    
cufflinks 4.68211 0.0 13.136    
cufflinks 5.064       High
cufflinks 1.445       Low
cufflinks 3.838        
cufflinks 4.104        
cufflinks 4.434       High
cufflinks 0.962       Low
cufflinks 2.837        
cufflinks 2.378        
cufflinks 4.852       High
cufflinks 2.461        
cufflinks 2.695        
cufflinks 1.506       Low
cufflinks 2.968        
cufflinks 3.86        
cufflinks 1.563       Low
cufflinks 2.67        
cufflinks 2.461        

0 Strain