Gene : Glyma.05G209500 G. max Wm82.a2.v1
Defline:  (1 of 26) PF01388 - ARID/BRIGHT DNA binding domain (ARID) Genomic Order:  2095
Name:  ? Glyma.05G209500 Secondary Identifier:  ? PAC:30527194
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G209500 0.5kb upstream 0.5kb upstream 8281 true Chr05: 39144378-39152658 Glycine max
Glyma.05G209500 0.5kb upstream 0.5kb upstream 500 false Chr05: 39152159-39152658 Glycine max
Glyma.05G209500 0.5kb downstream 0.5kb downstream 8281 true Chr05: 39143878-39152158 Glycine max
Glyma.05G209500 0.5kb downstream 0.5kb downstream 500 false Chr05: 39143878-39144377 Glycine max
Glyma.05G209500 1.0kb upstream 1.0kb upstream 8781 true Chr05: 39144378-39153158 Glycine max
Glyma.05G209500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39152159-39153158 Glycine max
Glyma.05G209500 1.0kb downstream 1.0kb downstream 8781 true Chr05: 39143378-39152158 Glycine max
Glyma.05G209500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39143378-39144377 Glycine max
Glyma.05G209500 2.0kb upstream 2.0kb upstream 9781 true Chr05: 39144378-39154158 Glycine max
Glyma.05G209500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39152159-39154158 Glycine max
Glyma.05G209500 2.0kb downstream 2.0kb downstream 9781 true Chr05: 39142378-39152158 Glycine max
Glyma.05G209500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39142378-39144377 Glycine max
Glyma.05G209500 5.0kb upstream 5.0kb upstream 12781 true Chr05: 39144378-39157158 Glycine max
Glyma.05G209500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39152159-39157158 Glycine max
Glyma.05G209500 5.0kb downstream 5.0kb downstream 12781 true Chr05: 39139378-39152158 Glycine max
Glyma.05G209500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39139378-39144377 Glycine max
Glyma.05G209500 10.0kb upstream 10.0kb upstream 17781 true Chr05: 39144378-39162158 Glycine max
Glyma.05G209500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39152159-39162158 Glycine max
Glyma.05G209500 10.0kb downstream 10.0kb downstream 17781 true Chr05: 39134378-39152158 Glycine max
Glyma.05G209500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39134378-39144377 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301307 5265 Fabidae View MSA
124068445 5270 Rosid View MSA
123753441 5271 Pentapetalae View MSA
122795804 5272 Eudicot View MSA
122049441 5273 Angiosperm View MSA
121348389 5274 Embryophyte View MSA
123380842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.01653 0.0 8.72623   Low
cufflinks 5.19795 0.0 14.2316    
cufflinks 2.79266 0.0 8.12991   Low
cufflinks 5.57221 0.0 15.1779    
cufflinks 5.09392 0.0 13.986    
cufflinks 3.88124 0.0 10.901    
cufflinks 8.58703 0.0 22.977   High
cufflinks 4.44421 0.0 12.3149    
cufflinks 4.49892 0.0 12.4624    
cufflinks 1.965        
cufflinks 0.387       Low
cufflinks 2.098        
cufflinks 1.997        
cufflinks 2.73       High
cufflinks 0.707        
cufflinks 1.362        
cufflinks 0.813        
cufflinks 2.314       High
cufflinks 2.556       High
cufflinks 1.13        
cufflinks 0.549       Low
cufflinks 1.374        
cufflinks 1.447        
cufflinks 0.584       Low
cufflinks 1.055        
cufflinks 0.521       Low

0 Strain