Gene : Glyma.05G213000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10794:SF58 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  2130
Name:  ? Glyma.05G213000 Secondary Identifier:  ? PAC:30525303
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G213000 0.5kb upstream 0.5kb upstream 5123 true Chr05: 39448663-39453785 Glycine max
Glyma.05G213000 0.5kb upstream 0.5kb upstream 500 false Chr05: 39453286-39453785 Glycine max
Glyma.05G213000 0.5kb downstream 0.5kb downstream 5123 true Chr05: 39448163-39453285 Glycine max
Glyma.05G213000 0.5kb downstream 0.5kb downstream 500 false Chr05: 39448163-39448662 Glycine max
Glyma.05G213000 1.0kb upstream 1.0kb upstream 5623 true Chr05: 39448663-39454285 Glycine max
Glyma.05G213000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39453286-39454285 Glycine max
Glyma.05G213000 1.0kb downstream 1.0kb downstream 5623 true Chr05: 39447663-39453285 Glycine max
Glyma.05G213000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39447663-39448662 Glycine max
Glyma.05G213000 2.0kb upstream 2.0kb upstream 6623 true Chr05: 39448663-39455285 Glycine max
Glyma.05G213000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39453286-39455285 Glycine max
Glyma.05G213000 2.0kb downstream 2.0kb downstream 6623 true Chr05: 39446663-39453285 Glycine max
Glyma.05G213000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39446663-39448662 Glycine max
Glyma.05G213000 5.0kb upstream 5.0kb upstream 9623 true Chr05: 39448663-39458285 Glycine max
Glyma.05G213000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39453286-39458285 Glycine max
Glyma.05G213000 5.0kb downstream 5.0kb downstream 9623 true Chr05: 39443663-39453285 Glycine max
Glyma.05G213000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39443663-39448662 Glycine max
Glyma.05G213000 10.0kb upstream 10.0kb upstream 14623 true Chr05: 39448663-39463285 Glycine max
Glyma.05G213000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39453286-39463285 Glycine max
Glyma.05G213000 10.0kb downstream 10.0kb downstream 14623 true Chr05: 39438663-39453285 Glycine max
Glyma.05G213000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39438663-39448662 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307790 5265 Fabidae View MSA
124068174 5270 Rosid View MSA
123739909 5271 Pentapetalae View MSA
122789492 5272 Eudicot View MSA
122042662 5273 Angiosperm View MSA
121345279 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.78853 0.0 26.9143   High
cufflinks 7.38146 0.0 20.802    
cufflinks 8.90639 0.0 24.6037   High
cufflinks 7.32285 0.0 20.6544    
cufflinks 5.00407 0.0 14.8019    
cufflinks 4.11476 0.0 12.4799   Low
cufflinks 4.88481 0.0 14.4961    
cufflinks 7.32154 0.0 20.6408    
cufflinks 4.56612 0.0 13.6532   Low
cufflinks 1.174        
cufflinks 0.99       Low
cufflinks 2.61       High
cufflinks 1.152        
cufflinks 1.476        
cufflinks 1.274        
cufflinks 2.216        
cufflinks 0.806       Low
cufflinks 2.198        
cufflinks 2.633       High
cufflinks 1.976        
cufflinks 1.083        
cufflinks 2.222        
cufflinks 2.487       High
cufflinks 1.433        
cufflinks 1.796        
cufflinks 0.95       Low

0 Strain