Gene : Glyma.05G215000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18937:SF216 - TRANSCRIPTION FACTOR, PUTATIVE, 74638-73126-RELATED Genomic Order:  2150
Name:  ? Glyma.05G215000 Secondary Identifier:  ? PAC:30525933
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G215000 0.5kb upstream 0.5kb upstream 5574 true Chr05: 39580887-39586460 Glycine max
Glyma.05G215000 0.5kb upstream 0.5kb upstream 500 false Chr05: 39580887-39581386 Glycine max
Glyma.05G215000 0.5kb downstream 0.5kb downstream 5574 true Chr05: 39581387-39586960 Glycine max
Glyma.05G215000 0.5kb downstream 0.5kb downstream 500 false Chr05: 39586461-39586960 Glycine max
Glyma.05G215000 1.0kb upstream 1.0kb upstream 6074 true Chr05: 39580387-39586460 Glycine max
Glyma.05G215000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39580387-39581386 Glycine max
Glyma.05G215000 1.0kb downstream 1.0kb downstream 6074 true Chr05: 39581387-39587460 Glycine max
Glyma.05G215000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39586461-39587460 Glycine max
Glyma.05G215000 2.0kb upstream 2.0kb upstream 7074 true Chr05: 39579387-39586460 Glycine max
Glyma.05G215000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39579387-39581386 Glycine max
Glyma.05G215000 2.0kb downstream 2.0kb downstream 7074 true Chr05: 39581387-39588460 Glycine max
Glyma.05G215000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39586461-39588460 Glycine max
Glyma.05G215000 5.0kb upstream 5.0kb upstream 10074 true Chr05: 39576387-39586460 Glycine max
Glyma.05G215000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39576387-39581386 Glycine max
Glyma.05G215000 5.0kb downstream 5.0kb downstream 10074 true Chr05: 39581387-39591460 Glycine max
Glyma.05G215000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39586461-39591460 Glycine max
Glyma.05G215000 10.0kb upstream 10.0kb upstream 15074 true Chr05: 39571387-39586460 Glycine max
Glyma.05G215000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39571387-39581386 Glycine max
Glyma.05G215000 10.0kb downstream 10.0kb downstream 15074 true Chr05: 39581387-39596460 Glycine max
Glyma.05G215000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39586461-39596460 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310408 5265 Fabidae View MSA
124073525 5270 Rosid View MSA
123749217 5271 Pentapetalae View MSA
122792770 5272 Eudicot View MSA
122049779 5273 Angiosperm View MSA
121351769 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.22521 0.0 0.838606    
cufflinks 0.117211 0.0 0.449195 Low  
cufflinks 0.805666 0.0 2.72093   High
cufflinks 0.0537243 0.0 0.212187 Low Low
cufflinks 0.116891 0.0 0.44866 Low  
cufflinks 0.206864 0.0 0.773989 Low  
cufflinks 0.0689698 0.0 0.270566 Low  
cufflinks 0.111171 0.0 0.426662 Low  
cufflinks 0.122514 0.0 0.468935 Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.167       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.083        
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.695       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain