Gene : Glyma.05G216700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11349:SF53 - NUCLEOSIDE DIPHOSPHATE KINASE-RELATED Genomic Order:  2167
Name:  ? Glyma.05G216700 Secondary Identifier:  ? PAC:30524960
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-6126 Glycine max pathologic  
Gmax PWY-6545 Glycine max pathologic  
Gmax PWY-7176 Glycine max pathologic  
Gmax PWY-7184 Glycine max pathologic  
Gmax PWY-7196 Glycine max pathologic  
Gmax PWY-7197 Glycine max pathologic  
Gmax PWY-7200 Glycine max pathologic  
Gmax PWY-7205 Glycine max pathologic  
Gmax PWY-7208 Glycine max pathologic  
Gmax PWY-7210 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  
Gmax PWY-7220 Glycine max pathologic  
Gmax PWY-7221 Glycine max pathologic  
Gmax PWY-7222 Glycine max pathologic  
Gmax PWY-7224 Glycine max pathologic  
Gmax PWY-7226 Glycine max pathologic  
Gmax PWY-7227 Glycine max pathologic  
Gmax PWY-7228 Glycine max pathologic  
Gmax PWY-7229 Glycine max pathologic  
Gmax PWY-841 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G216700 0.5kb upstream 0.5kb upstream 3666 true Chr05: 39696647-39700312 Glycine max
Glyma.05G216700 0.5kb upstream 0.5kb upstream 500 false Chr05: 39699813-39700312 Glycine max
Glyma.05G216700 0.5kb downstream 0.5kb downstream 3666 true Chr05: 39696147-39699812 Glycine max
Glyma.05G216700 0.5kb downstream 0.5kb downstream 500 false Chr05: 39696147-39696646 Glycine max
Glyma.05G216700 1.0kb upstream 1.0kb upstream 4166 true Chr05: 39696647-39700812 Glycine max
Glyma.05G216700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39699813-39700812 Glycine max
Glyma.05G216700 1.0kb downstream 1.0kb downstream 4166 true Chr05: 39695647-39699812 Glycine max
Glyma.05G216700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39695647-39696646 Glycine max
Glyma.05G216700 2.0kb upstream 2.0kb upstream 5166 true Chr05: 39696647-39701812 Glycine max
Glyma.05G216700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39699813-39701812 Glycine max
Glyma.05G216700 2.0kb downstream 2.0kb downstream 5166 true Chr05: 39694647-39699812 Glycine max
Glyma.05G216700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39694647-39696646 Glycine max
Glyma.05G216700 5.0kb upstream 5.0kb upstream 8166 true Chr05: 39696647-39704812 Glycine max
Glyma.05G216700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39699813-39704812 Glycine max
Glyma.05G216700 5.0kb downstream 5.0kb downstream 8166 true Chr05: 39691647-39699812 Glycine max
Glyma.05G216700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39691647-39696646 Glycine max
Glyma.05G216700 10.0kb upstream 10.0kb upstream 13166 true Chr05: 39696647-39709812 Glycine max
Glyma.05G216700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39699813-39709812 Glycine max
Glyma.05G216700 10.0kb downstream 10.0kb downstream 13166 true Chr05: 39686647-39699812 Glycine max
Glyma.05G216700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39686647-39696646 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312585 5265 Fabidae View MSA
124068099 5270 Rosid View MSA
123749251 5271 Pentapetalae View MSA
122792257 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.5254 0.0 114.977 High  
cufflinks 111.575 0.0 334.091 High High
cufflinks 54.3963 0.0 149.726 High  
cufflinks 36.8143 0.0 98.9061 High  
cufflinks 63.6261 0.0 177.739 High  
cufflinks 93.5691 0.0 273.958 High High
cufflinks 44.3358 0.0 120.236 High  
cufflinks 32.9948 0.0 88.3453 High  
cufflinks 28.3796 0.0 75.7624 High Low
cufflinks 50.223     High High
cufflinks 3.667       Low
cufflinks 20.487     High  
cufflinks 37.733     High  
cufflinks 37.16     High  
cufflinks 2.394       Low
cufflinks 30.044     High  
cufflinks 6.208     High Low
cufflinks 38.292     High  
cufflinks 39.711     High  
cufflinks 24.367     High  
cufflinks 7.445     High  
cufflinks 23.349     High  
cufflinks 31.907     High  
cufflinks 4.809       Low
cufflinks 28.824     High  
cufflinks 9.257     High  

0 Strain