Gene : Glyma.05G204000 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2014 - SMT3/SUMO-activating complex, AOS1/RAD31 component Genomic Order:  2040
Name:  ? Glyma.05G204000 Secondary Identifier:  ? PAC:30526110
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G204000 0.5kb upstream 0.5kb upstream 4763 true Chr05: 38752639-38757401 Glycine max
Glyma.05G204000 0.5kb upstream 0.5kb upstream 500 false Chr05: 38756902-38757401 Glycine max
Glyma.05G204000 0.5kb downstream 0.5kb downstream 4763 true Chr05: 38752139-38756901 Glycine max
Glyma.05G204000 0.5kb downstream 0.5kb downstream 500 false Chr05: 38752139-38752638 Glycine max
Glyma.05G204000 1.0kb upstream 1.0kb upstream 5263 true Chr05: 38752639-38757901 Glycine max
Glyma.05G204000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38756902-38757901 Glycine max
Glyma.05G204000 1.0kb downstream 1.0kb downstream 5263 true Chr05: 38751639-38756901 Glycine max
Glyma.05G204000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38751639-38752638 Glycine max
Glyma.05G204000 2.0kb upstream 2.0kb upstream 6263 true Chr05: 38752639-38758901 Glycine max
Glyma.05G204000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38756902-38758901 Glycine max
Glyma.05G204000 2.0kb downstream 2.0kb downstream 6263 true Chr05: 38750639-38756901 Glycine max
Glyma.05G204000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38750639-38752638 Glycine max
Glyma.05G204000 5.0kb upstream 5.0kb upstream 9263 true Chr05: 38752639-38761901 Glycine max
Glyma.05G204000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38756902-38761901 Glycine max
Glyma.05G204000 5.0kb downstream 5.0kb downstream 9263 true Chr05: 38747639-38756901 Glycine max
Glyma.05G204000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38747639-38752638 Glycine max
Glyma.05G204000 10.0kb upstream 10.0kb upstream 14263 true Chr05: 38752639-38766901 Glycine max
Glyma.05G204000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38756902-38766901 Glycine max
Glyma.05G204000 10.0kb downstream 10.0kb downstream 14263 true Chr05: 38742639-38756901 Glycine max
Glyma.05G204000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38742639-38752638 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041218 5273 Angiosperm View MSA
122300905 5265 Fabidae View MSA
124063789 5270 Rosid View MSA
123737552 5271 Pentapetalae View MSA
122790997 5272 Eudicot View MSA
121348552 5274 Embryophyte View MSA
123424130 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.6589 0.0 169.83 High High
cufflinks 31.3263 0.0 151.394 High  
cufflinks 34.3156 0.0 169.82 High High
cufflinks 20.0948 0.0 89.1311 High  
cufflinks 19.7455 0.0 82.31    
cufflinks 24.508 0.0 108.094 High  
cufflinks 22.2196 0.0 115.368 High  
cufflinks 18.5712 0.0 77.0643   Low
cufflinks 23.5729 0.0 114.482 High  
cufflinks 0.861       Low
cufflinks 1.757        
cufflinks 1.763        
cufflinks 1.302        
cufflinks 1.41        
cufflinks 1.33        
cufflinks 1.468        
cufflinks 1.044       Low
cufflinks 1.62        
cufflinks 2.092       High
cufflinks 1.632        
cufflinks 1.616        
cufflinks 1.718        
cufflinks 1.882        
cufflinks 2.025       High
cufflinks 1.509        
cufflinks 1.431        

0 Strain