Gene : Glyma.05G199400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF00153//PF13833 - Mitochondrial carrier protein (Mito_carr) // EF-hand domain pair (EF-hand_8) Genomic Order:  1994
Name:  ? Glyma.05G199400 Secondary Identifier:  ? PAC:30526459
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G199400 0.5kb upstream 0.5kb upstream 4216 true Chr05: 38331175-38335390 Glycine max
Glyma.05G199400 0.5kb upstream 0.5kb upstream 500 false Chr05: 38334891-38335390 Glycine max
Glyma.05G199400 0.5kb downstream 0.5kb downstream 4216 true Chr05: 38330675-38334890 Glycine max
Glyma.05G199400 0.5kb downstream 0.5kb downstream 500 false Chr05: 38330675-38331174 Glycine max
Glyma.05G199400 1.0kb upstream 1.0kb upstream 4716 true Chr05: 38331175-38335890 Glycine max
Glyma.05G199400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38334891-38335890 Glycine max
Glyma.05G199400 1.0kb downstream 1.0kb downstream 4716 true Chr05: 38330175-38334890 Glycine max
Glyma.05G199400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38330175-38331174 Glycine max
Glyma.05G199400 2.0kb upstream 2.0kb upstream 5716 true Chr05: 38331175-38336890 Glycine max
Glyma.05G199400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38334891-38336890 Glycine max
Glyma.05G199400 2.0kb downstream 2.0kb downstream 5716 true Chr05: 38329175-38334890 Glycine max
Glyma.05G199400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38329175-38331174 Glycine max
Glyma.05G199400 5.0kb upstream 5.0kb upstream 8716 true Chr05: 38331175-38339890 Glycine max
Glyma.05G199400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38334891-38339890 Glycine max
Glyma.05G199400 5.0kb downstream 5.0kb downstream 8716 true Chr05: 38326175-38334890 Glycine max
Glyma.05G199400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38326175-38331174 Glycine max
Glyma.05G199400 10.0kb upstream 10.0kb upstream 13716 true Chr05: 38331175-38344890 Glycine max
Glyma.05G199400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38334891-38344890 Glycine max
Glyma.05G199400 10.0kb downstream 10.0kb downstream 13716 true Chr05: 38321175-38334890 Glycine max
Glyma.05G199400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38321175-38331174 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302198 5265 Fabidae View MSA
124072289 5270 Rosid View MSA
123740149 5271 Pentapetalae View MSA
122790227 5272 Eudicot View MSA
122042034 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349229 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.06012 0.0 16.7878    
cufflinks 4.30618 0.0 14.8989    
cufflinks 4.47973 0.0 15.2246    
cufflinks 5.35249 0.0 20.3094    
cufflinks 4.37867 0.0 15.0647    
cufflinks 4.20874 0.0 14.6093    
cufflinks 7.56782 0.0 27.0062   High
cufflinks 3.4428 0.0 12.6856   Low
cufflinks 3.44855 0.0 12.6979   Low
cufflinks 1.445        
cufflinks 1.331        
cufflinks 1.606        
cufflinks 1.425        
cufflinks 1.981        
cufflinks 0.972       Low
cufflinks 1.305        
cufflinks 2.196        
cufflinks 1.807        
cufflinks 1.619        
cufflinks 1.539        
cufflinks 2.823       High
cufflinks 1.52        
cufflinks 1.765        
cufflinks 1.406        
cufflinks 1.371        
cufflinks 3.683       High

0 Strain