Gene : Glyma.05G201200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10159//PTHR10159:SF346 - DUAL SPECIFICITY PROTEIN PHOSPHATASE Genomic Order:  2012
Name:  ? Glyma.05G201200 Secondary Identifier:  ? PAC:30524630
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G201200 0.5kb upstream 0.5kb upstream 8401 true Chr05: 38493575-38501975 Glycine max
Glyma.05G201200 0.5kb upstream 0.5kb upstream 500 false Chr05: 38501476-38501975 Glycine max
Glyma.05G201200 0.5kb downstream 0.5kb downstream 8401 true Chr05: 38493075-38501475 Glycine max
Glyma.05G201200 0.5kb downstream 0.5kb downstream 500 false Chr05: 38493075-38493574 Glycine max
Glyma.05G201200 1.0kb upstream 1.0kb upstream 8901 true Chr05: 38493575-38502475 Glycine max
Glyma.05G201200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38501476-38502475 Glycine max
Glyma.05G201200 1.0kb downstream 1.0kb downstream 8901 true Chr05: 38492575-38501475 Glycine max
Glyma.05G201200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38492575-38493574 Glycine max
Glyma.05G201200 2.0kb upstream 2.0kb upstream 9901 true Chr05: 38493575-38503475 Glycine max
Glyma.05G201200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38501476-38503475 Glycine max
Glyma.05G201200 2.0kb downstream 2.0kb downstream 9901 true Chr05: 38491575-38501475 Glycine max
Glyma.05G201200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38491575-38493574 Glycine max
Glyma.05G201200 5.0kb upstream 5.0kb upstream 12901 true Chr05: 38493575-38506475 Glycine max
Glyma.05G201200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38501476-38506475 Glycine max
Glyma.05G201200 5.0kb downstream 5.0kb downstream 12901 true Chr05: 38488575-38501475 Glycine max
Glyma.05G201200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38488575-38493574 Glycine max
Glyma.05G201200 10.0kb upstream 10.0kb upstream 17901 true Chr05: 38493575-38511475 Glycine max
Glyma.05G201200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38501476-38511475 Glycine max
Glyma.05G201200 10.0kb downstream 10.0kb downstream 17901 true Chr05: 38483575-38501475 Glycine max
Glyma.05G201200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38483575-38493574 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041294 5273 Angiosperm View MSA
122309440 5265 Fabidae View MSA
124067435 5270 Rosid View MSA
123746007 5271 Pentapetalae View MSA
122792622 5272 Eudicot View MSA
121347870 5274 Embryophyte View MSA
123426209 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.373778 0.0 1.65916   Low
cufflinks 2.21574 0.0 7.97907    
cufflinks 0.582857 0.0 2.33395   Low
cufflinks 2.22528 0.0 9.30527    
cufflinks 3.12544 0.0 14.9086   High
cufflinks 1.07757 0.0 4.88669    
cufflinks 1.58582 0.0 6.47407    
cufflinks 1.55567 0.0 6.30848    
cufflinks 1.08547 0.0 3.80429    
cufflinks 0.314        
cufflinks 0.017     Low Low
cufflinks 0.141        
cufflinks 0.342        
cufflinks 0.546       High
cufflinks 0.007     Low Low
cufflinks 0.172        
cufflinks 0.044     Low  
cufflinks 0.367       High
cufflinks 0.355       High
cufflinks 0.126        
cufflinks 0.035     Low  
cufflinks 0.14        
cufflinks 0.133        
cufflinks 0.019     Low Low
cufflinks 0.137        
cufflinks 0.072        

0 Strain