Gene : Glyma.05G201900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31421:SF3 - PROTEIN BASIC PENTACYSTEINE4-RELATED Genomic Order:  2019
Name:  ? Glyma.05G201900 Secondary Identifier:  ? PAC:30525420
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G201900 0.5kb upstream 0.5kb upstream 4553 true Chr05: 38551195-38555747 Glycine max
Glyma.05G201900 0.5kb upstream 0.5kb upstream 500 false Chr05: 38551195-38551694 Glycine max
Glyma.05G201900 0.5kb downstream 0.5kb downstream 4553 true Chr05: 38551695-38556247 Glycine max
Glyma.05G201900 0.5kb downstream 0.5kb downstream 500 false Chr05: 38555748-38556247 Glycine max
Glyma.05G201900 1.0kb upstream 1.0kb upstream 5053 true Chr05: 38550695-38555747 Glycine max
Glyma.05G201900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38550695-38551694 Glycine max
Glyma.05G201900 1.0kb downstream 1.0kb downstream 5053 true Chr05: 38551695-38556747 Glycine max
Glyma.05G201900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38555748-38556747 Glycine max
Glyma.05G201900 2.0kb upstream 2.0kb upstream 6053 true Chr05: 38549695-38555747 Glycine max
Glyma.05G201900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38549695-38551694 Glycine max
Glyma.05G201900 2.0kb downstream 2.0kb downstream 6053 true Chr05: 38551695-38557747 Glycine max
Glyma.05G201900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38555748-38557747 Glycine max
Glyma.05G201900 5.0kb upstream 5.0kb upstream 9053 true Chr05: 38546695-38555747 Glycine max
Glyma.05G201900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38546695-38551694 Glycine max
Glyma.05G201900 5.0kb downstream 5.0kb downstream 9053 true Chr05: 38551695-38560747 Glycine max
Glyma.05G201900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38555748-38560747 Glycine max
Glyma.05G201900 10.0kb upstream 10.0kb upstream 14053 true Chr05: 38541695-38555747 Glycine max
Glyma.05G201900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38541695-38551694 Glycine max
Glyma.05G201900 10.0kb downstream 10.0kb downstream 14053 true Chr05: 38551695-38565747 Glycine max
Glyma.05G201900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38555748-38565747 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307152 5265 Fabidae View MSA
124062231 5270 Rosid View MSA
123743599 5271 Pentapetalae View MSA
122787998 5272 Eudicot View MSA
122045937 5273 Angiosperm View MSA
121350358 5274 Embryophyte View MSA
123381694 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.35193 0.0 10.0971   Low
cufflinks 4.41135 0.0 22.2973   High
cufflinks 1.12539 0.0 7.87133   Low
cufflinks 1.76508 0.0 11.6382    
cufflinks 2.52411 0.0 17.0073    
cufflinks 3.0766 0.0 13.0096    
cufflinks 5.62535 0.0 27.8686   High
cufflinks 2.02068 0.0 13.3936    
cufflinks 2.66731 0.0 15.944    
cufflinks 0.201        
cufflinks 0.054       Low
cufflinks 0.154        
cufflinks 0.251        
cufflinks 0.255        
cufflinks 0.048     Low Low
cufflinks 0.214        
cufflinks 0.082        
cufflinks 0.202        
cufflinks 0.386       High
cufflinks 0.153        
cufflinks 0.059     Low Low
cufflinks 0.207        
cufflinks 0.311       High
cufflinks 0.061       Low
cufflinks 0.2        
cufflinks 0.09        

0 Strain