Gene : Glyma.05G202100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32387:SF3 - ATP/DNA BINDING PROTEIN Genomic Order:  2021
Name:  ? Glyma.05G202100 Secondary Identifier:  ? PAC:30525698
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G202100 0.5kb upstream 0.5kb upstream 5501 true Chr05: 38572829-38578329 Glycine max
Glyma.05G202100 0.5kb upstream 0.5kb upstream 500 false Chr05: 38572829-38573328 Glycine max
Glyma.05G202100 0.5kb downstream 0.5kb downstream 5501 true Chr05: 38573329-38578829 Glycine max
Glyma.05G202100 0.5kb downstream 0.5kb downstream 500 false Chr05: 38578330-38578829 Glycine max
Glyma.05G202100 1.0kb upstream 1.0kb upstream 6001 true Chr05: 38572329-38578329 Glycine max
Glyma.05G202100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38572329-38573328 Glycine max
Glyma.05G202100 1.0kb downstream 1.0kb downstream 6001 true Chr05: 38573329-38579329 Glycine max
Glyma.05G202100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38578330-38579329 Glycine max
Glyma.05G202100 2.0kb upstream 2.0kb upstream 7001 true Chr05: 38571329-38578329 Glycine max
Glyma.05G202100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38571329-38573328 Glycine max
Glyma.05G202100 2.0kb downstream 2.0kb downstream 7001 true Chr05: 38573329-38580329 Glycine max
Glyma.05G202100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38578330-38580329 Glycine max
Glyma.05G202100 5.0kb upstream 5.0kb upstream 10001 true Chr05: 38568329-38578329 Glycine max
Glyma.05G202100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38568329-38573328 Glycine max
Glyma.05G202100 5.0kb downstream 5.0kb downstream 10001 true Chr05: 38573329-38583329 Glycine max
Glyma.05G202100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38578330-38583329 Glycine max
Glyma.05G202100 10.0kb upstream 10.0kb upstream 15001 true Chr05: 38563329-38578329 Glycine max
Glyma.05G202100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38563329-38573328 Glycine max
Glyma.05G202100 10.0kb downstream 10.0kb downstream 15001 true Chr05: 38573329-38588329 Glycine max
Glyma.05G202100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38578330-38588329 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312784 5265 Fabidae View MSA
124036740 5270 Rosid View MSA
123752239 5271 Pentapetalae View MSA
122774430 5272 Eudicot View MSA
122050414 5273 Angiosperm View MSA
121347481 5274 Embryophyte View MSA
123380559 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0261713 0.0 0.106891 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low High
cufflinks 0.003     Low  
cufflinks 0.011     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain