Gene : Glyma.05G196500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11730:SF38 - AMMONIUM TRANSPORTER 2 Genomic Order:  1965
Name:  ? Glyma.05G196500 Secondary Identifier:  ? PAC:30526696
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G196500 0.5kb upstream 0.5kb upstream 5798 true Chr05: 38071633-38077430 Glycine max
Glyma.05G196500 0.5kb upstream 0.5kb upstream 500 false Chr05: 38076931-38077430 Glycine max
Glyma.05G196500 0.5kb downstream 0.5kb downstream 5798 true Chr05: 38071133-38076930 Glycine max
Glyma.05G196500 0.5kb downstream 0.5kb downstream 500 false Chr05: 38071133-38071632 Glycine max
Glyma.05G196500 1.0kb upstream 1.0kb upstream 6298 true Chr05: 38071633-38077930 Glycine max
Glyma.05G196500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38076931-38077930 Glycine max
Glyma.05G196500 1.0kb downstream 1.0kb downstream 6298 true Chr05: 38070633-38076930 Glycine max
Glyma.05G196500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38070633-38071632 Glycine max
Glyma.05G196500 2.0kb upstream 2.0kb upstream 7298 true Chr05: 38071633-38078930 Glycine max
Glyma.05G196500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38076931-38078930 Glycine max
Glyma.05G196500 2.0kb downstream 2.0kb downstream 7298 true Chr05: 38069633-38076930 Glycine max
Glyma.05G196500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38069633-38071632 Glycine max
Glyma.05G196500 5.0kb upstream 5.0kb upstream 10298 true Chr05: 38071633-38081930 Glycine max
Glyma.05G196500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38076931-38081930 Glycine max
Glyma.05G196500 5.0kb downstream 5.0kb downstream 10298 true Chr05: 38066633-38076930 Glycine max
Glyma.05G196500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38066633-38071632 Glycine max
Glyma.05G196500 10.0kb upstream 10.0kb upstream 15298 true Chr05: 38071633-38086930 Glycine max
Glyma.05G196500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38076931-38086930 Glycine max
Glyma.05G196500 10.0kb downstream 10.0kb downstream 15298 true Chr05: 38061633-38076930 Glycine max
Glyma.05G196500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38061633-38071632 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303159 5265 Fabidae View MSA
124072416 5270 Rosid View MSA
123737751 5271 Pentapetalae View MSA
122794569 5272 Eudicot View MSA
122050479 5273 Angiosperm View MSA
121349558 5274 Embryophyte View MSA
123426943 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 13.7456 0.0 36.7209    
cufflinks 18.9692 0.0 50.6688    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0341163 0.0 0.141284 Low Low
cufflinks 8.87399 0.0 24.1362    
cufflinks 0.006     Low  
cufflinks 0.192        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.407       High
cufflinks 1.709        
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.554       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low Low
cufflinks 0.284        
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.18        
cufflinks 0.003     Low Low
cufflinks 2.687       High

0 Strain