Gene : Glyma.05G197200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23086:SF39 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 3 Genomic Order:  1972
Name:  ? Glyma.05G197200 Secondary Identifier:  ? PAC:30526257
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6351 Glycine max pathologic  
Gmax PWY-6352 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G197200 0.5kb upstream 0.5kb upstream 6089 true Chr05: 38144674-38150762 Glycine max
Glyma.05G197200 0.5kb upstream 0.5kb upstream 500 false Chr05: 38150263-38150762 Glycine max
Glyma.05G197200 0.5kb downstream 0.5kb downstream 6089 true Chr05: 38144174-38150262 Glycine max
Glyma.05G197200 0.5kb downstream 0.5kb downstream 500 false Chr05: 38144174-38144673 Glycine max
Glyma.05G197200 1.0kb upstream 1.0kb upstream 6589 true Chr05: 38144674-38151262 Glycine max
Glyma.05G197200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38150263-38151262 Glycine max
Glyma.05G197200 1.0kb downstream 1.0kb downstream 6589 true Chr05: 38143674-38150262 Glycine max
Glyma.05G197200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38143674-38144673 Glycine max
Glyma.05G197200 2.0kb upstream 2.0kb upstream 7589 true Chr05: 38144674-38152262 Glycine max
Glyma.05G197200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38150263-38152262 Glycine max
Glyma.05G197200 2.0kb downstream 2.0kb downstream 7589 true Chr05: 38142674-38150262 Glycine max
Glyma.05G197200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38142674-38144673 Glycine max
Glyma.05G197200 5.0kb upstream 5.0kb upstream 10589 true Chr05: 38144674-38155262 Glycine max
Glyma.05G197200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38150263-38155262 Glycine max
Glyma.05G197200 5.0kb downstream 5.0kb downstream 10589 true Chr05: 38139674-38150262 Glycine max
Glyma.05G197200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38139674-38144673 Glycine max
Glyma.05G197200 10.0kb upstream 10.0kb upstream 15589 true Chr05: 38144674-38160262 Glycine max
Glyma.05G197200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38150263-38160262 Glycine max
Glyma.05G197200 10.0kb downstream 10.0kb downstream 15589 true Chr05: 38134674-38150262 Glycine max
Glyma.05G197200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38134674-38144673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254853 5265 Fabidae View MSA
124037596 5270 Rosid View MSA
123742994 5271 Pentapetalae View MSA
122794503 5272 Eudicot View MSA
122045455 5273 Angiosperm View MSA
121310450 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.236183 0.0 1.518   Low
cufflinks 5.34907 0.0 20.1162   High
cufflinks 0.728406 0.0 4.29164    
cufflinks 7.17014 0.0 25.7698   High
cufflinks 1.46718 0.0 6.95388    
cufflinks 0.577748 0.0 3.66096    
cufflinks 1.13004 0.0 5.71053    
cufflinks 5.65903 0.0 21.3747   High
cufflinks 2.10746 0.0 8.89446    
cufflinks 0.694        
cufflinks 0.213       Low
cufflinks 1.081        
cufflinks 0.903        
cufflinks 0.724        
cufflinks 0.09       Low
cufflinks 1.153        
cufflinks 0.521        
cufflinks 1.566        
cufflinks 4.098       High
cufflinks 0.709        
cufflinks 0.25       Low
cufflinks 0.968        
cufflinks 1.205        
cufflinks 0.306        
cufflinks 0.795        
cufflinks 0.556        

0 Strain