Gene : Glyma.05G235600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13479:SF44 - F10K1.8 PROTEIN Genomic Order:  2356
Name:  ? Glyma.05G235600 Secondary Identifier:  ? PAC:30527191
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G235600 0.5kb upstream 0.5kb upstream 5251 true Chr05: 41226529-41231779 Glycine max
Glyma.05G235600 0.5kb upstream 0.5kb upstream 500 false Chr05: 41226529-41227028 Glycine max
Glyma.05G235600 0.5kb downstream 0.5kb downstream 5251 true Chr05: 41227029-41232279 Glycine max
Glyma.05G235600 0.5kb downstream 0.5kb downstream 500 false Chr05: 41231780-41232279 Glycine max
Glyma.05G235600 1.0kb upstream 1.0kb upstream 5751 true Chr05: 41226029-41231779 Glycine max
Glyma.05G235600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41226029-41227028 Glycine max
Glyma.05G235600 1.0kb downstream 1.0kb downstream 5751 true Chr05: 41227029-41232779 Glycine max
Glyma.05G235600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41231780-41232779 Glycine max
Glyma.05G235600 2.0kb upstream 2.0kb upstream 6751 true Chr05: 41225029-41231779 Glycine max
Glyma.05G235600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41225029-41227028 Glycine max
Glyma.05G235600 2.0kb downstream 2.0kb downstream 6751 true Chr05: 41227029-41233779 Glycine max
Glyma.05G235600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41231780-41233779 Glycine max
Glyma.05G235600 5.0kb upstream 5.0kb upstream 9751 true Chr05: 41222029-41231779 Glycine max
Glyma.05G235600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41222029-41227028 Glycine max
Glyma.05G235600 5.0kb downstream 5.0kb downstream 9751 true Chr05: 41227029-41236779 Glycine max
Glyma.05G235600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41231780-41236779 Glycine max
Glyma.05G235600 10.0kb upstream 10.0kb upstream 14751 true Chr05: 41217029-41231779 Glycine max
Glyma.05G235600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41217029-41227028 Glycine max
Glyma.05G235600 10.0kb downstream 10.0kb downstream 14751 true Chr05: 41227029-41241779 Glycine max
Glyma.05G235600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41231780-41241779 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310637 5265 Fabidae View MSA
124061211 5270 Rosid View MSA
123739724 5271 Pentapetalae View MSA
122786736 5272 Eudicot View MSA
122043226 5273 Angiosperm View MSA
121343856 5274 Embryophyte View MSA
123427429 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.8149 0.0 101.538 High  
cufflinks 23.1596 0.0 69.1625 High  
cufflinks 15.9166 0.0 49.1514   Low
cufflinks 21.855 0.0 65.4454 High  
cufflinks 43.7571 0.0 151.675 High High
cufflinks 30.6655 0.0 104.47 High  
cufflinks 29.3749 0.0 91.3393 High  
cufflinks 21.0375 0.0 72.7175    
cufflinks 40.5301 0.0 126.102 High High
cufflinks 2.598        
cufflinks 2.418       Low
cufflinks 3.459        
cufflinks 6.647       High
cufflinks 9.903     High High
cufflinks 3.782        
cufflinks 4.27        
cufflinks 2.203       Low
cufflinks 4.446        
cufflinks 3.191        
cufflinks 3.386        
cufflinks 3.001        
cufflinks 3.105        
cufflinks 3.201        
cufflinks 3.307        
cufflinks 4.25        
cufflinks 4.373        

0 Strain