Gene : Glyma.05G238400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10891//PTHR10891:SF631 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Genomic Order:  2384
Name:  ? Glyma.05G238400 Secondary Identifier:  ? PAC:30526672
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G238400 0.5kb upstream 0.5kb upstream 1067 true Chr05: 41442332-41443398 Glycine max
Glyma.05G238400 0.5kb upstream 0.5kb upstream 500 false Chr05: 41442899-41443398 Glycine max
Glyma.05G238400 0.5kb downstream 0.5kb downstream 1067 true Chr05: 41441832-41442898 Glycine max
Glyma.05G238400 0.5kb downstream 0.5kb downstream 500 false Chr05: 41441832-41442331 Glycine max
Glyma.05G238400 1.0kb upstream 1.0kb upstream 1567 true Chr05: 41442332-41443898 Glycine max
Glyma.05G238400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41442899-41443898 Glycine max
Glyma.05G238400 1.0kb downstream 1.0kb downstream 1567 true Chr05: 41441332-41442898 Glycine max
Glyma.05G238400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41441332-41442331 Glycine max
Glyma.05G238400 2.0kb upstream 2.0kb upstream 2567 true Chr05: 41442332-41444898 Glycine max
Glyma.05G238400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41442899-41444898 Glycine max
Glyma.05G238400 2.0kb downstream 2.0kb downstream 2567 true Chr05: 41440332-41442898 Glycine max
Glyma.05G238400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41440332-41442331 Glycine max
Glyma.05G238400 5.0kb upstream 5.0kb upstream 5567 true Chr05: 41442332-41447898 Glycine max
Glyma.05G238400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41442899-41447898 Glycine max
Glyma.05G238400 5.0kb downstream 5.0kb downstream 5567 true Chr05: 41437332-41442898 Glycine max
Glyma.05G238400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41437332-41442331 Glycine max
Glyma.05G238400 10.0kb upstream 10.0kb upstream 10567 true Chr05: 41442332-41452898 Glycine max
Glyma.05G238400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41442899-41452898 Glycine max
Glyma.05G238400 10.0kb downstream 10.0kb downstream 10567 true Chr05: 41432332-41442898 Glycine max
Glyma.05G238400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41432332-41442331 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312728 5265 Fabidae View MSA
124050277 5270 Rosid View MSA
123736874 5271 Pentapetalae View MSA
122791196 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.166605 0.0 0.678716 Low  
cufflinks 0.168719 0.0 0.688337 Low  
cufflinks 3.58024 0.0 12.7347   High
cufflinks 0.0714529 0.0 0.309503 Low  
cufflinks 0.319989 0.0 1.26499    
cufflinks 4.16492 0.0 14.4703   High
cufflinks 0.107249 0.0 0.447829 Low  
cufflinks 0.0841299 0.0 0.358746 Low  
cufflinks 0.208449 0.0 0.840648 Low  
cufflinks 0.05     Low Low
cufflinks 0.597        
cufflinks 0.391        
cufflinks 0.369        
cufflinks 0.129        
cufflinks 0.173        
cufflinks 0.131        
cufflinks 8.926     High High
cufflinks 2.317       High
cufflinks 0.508        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.243        
cufflinks 0.03     Low Low
cufflinks 0.209        
cufflinks 1.122        
cufflinks 0.103        
cufflinks 4.509       High

0 Strain