Gene : Glyma.05G241900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Genomic Order:  2419
Name:  ? Glyma.05G241900 Secondary Identifier:  ? PAC:30523963
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G241900 0.5kb upstream 0.5kb upstream 4542 true Chr05: 41697030-41701571 Glycine max
Glyma.05G241900 0.5kb upstream 0.5kb upstream 500 false Chr05: 41697030-41697529 Glycine max
Glyma.05G241900 0.5kb downstream 0.5kb downstream 4542 true Chr05: 41697530-41702071 Glycine max
Glyma.05G241900 0.5kb downstream 0.5kb downstream 500 false Chr05: 41701572-41702071 Glycine max
Glyma.05G241900 1.0kb upstream 1.0kb upstream 5042 true Chr05: 41696530-41701571 Glycine max
Glyma.05G241900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 41696530-41697529 Glycine max
Glyma.05G241900 1.0kb downstream 1.0kb downstream 5042 true Chr05: 41697530-41702571 Glycine max
Glyma.05G241900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 41701572-41702571 Glycine max
Glyma.05G241900 2.0kb upstream 2.0kb upstream 6042 true Chr05: 41695530-41701571 Glycine max
Glyma.05G241900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 41695530-41697529 Glycine max
Glyma.05G241900 2.0kb downstream 2.0kb downstream 6042 true Chr05: 41697530-41703571 Glycine max
Glyma.05G241900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 41701572-41703571 Glycine max
Glyma.05G241900 5.0kb upstream 5.0kb upstream 9042 true Chr05: 41692530-41701571 Glycine max
Glyma.05G241900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 41692530-41697529 Glycine max
Glyma.05G241900 5.0kb downstream 5.0kb downstream 9042 true Chr05: 41697530-41706571 Glycine max
Glyma.05G241900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 41701572-41706571 Glycine max
Glyma.05G241900 10.0kb upstream 10.0kb upstream 14042 true Chr05: 41687530-41701571 Glycine max
Glyma.05G241900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 41687530-41697529 Glycine max
Glyma.05G241900 10.0kb downstream 10.0kb downstream 14042 true Chr05: 41697530-41711571 Glycine max
Glyma.05G241900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 41701572-41711571 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026372 5273 Angiosperm View MSA
122311099 5265 Fabidae View MSA
124065155 5270 Rosid View MSA
123747063 5271 Pentapetalae View MSA
122788890 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121296298 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.13001 0.0 17.3613    
cufflinks 13.4851 0.0 36.1575    
cufflinks 1.2725 0.0 4.41045   Low
cufflinks 17.5095 0.0 46.7149    
cufflinks 9.09229 0.0 24.8569    
cufflinks 8.48066 0.0 23.3086    
cufflinks 7.31218 0.0 20.3191    
cufflinks 33.5571 0.0 91.407 High High
cufflinks 8.63001 0.0 23.6862    
cufflinks 8.01     High High
cufflinks 0.335       Low
cufflinks 1.562        
cufflinks 3.059        
cufflinks 2.428        
cufflinks 0.514       Low
cufflinks 3.32        
cufflinks 1.717        
cufflinks 2.596        
cufflinks 6.006       High
cufflinks 2.024        
cufflinks 0.492       Low
cufflinks 2.823        
cufflinks 4.448        
cufflinks 0.181       Low
cufflinks 2.601        
cufflinks 0.857        

0 Strain