Gene : Glyma.05G231400 G. max Wm82.a2.v1
Defline:  (1 of 8) KOG0092 - GTPase Rab5/YPT51 and related small G protein superfamily GTPases Genomic Order:  2314
Name:  ? Glyma.05G231400 Secondary Identifier:  ? PAC:30527511
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G231400 0.5kb upstream 0.5kb upstream 3417 true Chr05: 40903528-40906944 Glycine max
Glyma.05G231400 0.5kb upstream 0.5kb upstream 500 false Chr05: 40906445-40906944 Glycine max
Glyma.05G231400 0.5kb downstream 0.5kb downstream 3417 true Chr05: 40903028-40906444 Glycine max
Glyma.05G231400 0.5kb downstream 0.5kb downstream 500 false Chr05: 40903028-40903527 Glycine max
Glyma.05G231400 1.0kb upstream 1.0kb upstream 3917 true Chr05: 40903528-40907444 Glycine max
Glyma.05G231400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40906445-40907444 Glycine max
Glyma.05G231400 1.0kb downstream 1.0kb downstream 3917 true Chr05: 40902528-40906444 Glycine max
Glyma.05G231400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40902528-40903527 Glycine max
Glyma.05G231400 2.0kb upstream 2.0kb upstream 4917 true Chr05: 40903528-40908444 Glycine max
Glyma.05G231400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40906445-40908444 Glycine max
Glyma.05G231400 2.0kb downstream 2.0kb downstream 4917 true Chr05: 40901528-40906444 Glycine max
Glyma.05G231400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40901528-40903527 Glycine max
Glyma.05G231400 5.0kb upstream 5.0kb upstream 7917 true Chr05: 40903528-40911444 Glycine max
Glyma.05G231400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40906445-40911444 Glycine max
Glyma.05G231400 5.0kb downstream 5.0kb downstream 7917 true Chr05: 40898528-40906444 Glycine max
Glyma.05G231400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40898528-40903527 Glycine max
Glyma.05G231400 10.0kb upstream 10.0kb upstream 12917 true Chr05: 40903528-40916444 Glycine max
Glyma.05G231400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40906445-40916444 Glycine max
Glyma.05G231400 10.0kb downstream 10.0kb downstream 12917 true Chr05: 40893528-40906444 Glycine max
Glyma.05G231400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40893528-40903527 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307463 5265 Fabidae View MSA
124070426 5270 Rosid View MSA
123753240 5271 Pentapetalae View MSA
122795840 5272 Eudicot View MSA
122049622 5273 Angiosperm View MSA
121344376 5274 Embryophyte View MSA
123424016 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.15856 0.0 0.630556 Low  
cufflinks 11.1332 0.0 42.199   High
cufflinks 1.18134 0.0 6.96326    
cufflinks 0.0525632 0.0 0.221457 Low  
cufflinks 0.038224 0.0 0.171643 Low  
cufflinks 2.99268 0.0 14.6642   High
cufflinks 0.356876 0.0 1.80845    
cufflinks 0.020183 0.0 0.105022 Low Low
cufflinks 0.106        
cufflinks 0.003     Low  
cufflinks 1.173       High
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.002     Low Low
cufflinks 0.958       High
cufflinks 0.047     Low  
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.018     Low  
cufflinks 0.029     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.002     Low Low

0 Strain