Gene : Glyma.05G231600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33168:SF12 - EXPRESSED PROTEIN Genomic Order:  2316
Name:  ? Glyma.05G231600 Secondary Identifier:  ? PAC:30525592
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G231600 0.5kb upstream 0.5kb upstream 1262 true Chr05: 40911834-40913095 Glycine max
Glyma.05G231600 0.5kb upstream 0.5kb upstream 500 false Chr05: 40911834-40912333 Glycine max
Glyma.05G231600 0.5kb downstream 0.5kb downstream 1262 true Chr05: 40912334-40913595 Glycine max
Glyma.05G231600 0.5kb downstream 0.5kb downstream 500 false Chr05: 40913096-40913595 Glycine max
Glyma.05G231600 1.0kb upstream 1.0kb upstream 1762 true Chr05: 40911334-40913095 Glycine max
Glyma.05G231600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40911334-40912333 Glycine max
Glyma.05G231600 1.0kb downstream 1.0kb downstream 1762 true Chr05: 40912334-40914095 Glycine max
Glyma.05G231600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40913096-40914095 Glycine max
Glyma.05G231600 2.0kb upstream 2.0kb upstream 2762 true Chr05: 40910334-40913095 Glycine max
Glyma.05G231600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40910334-40912333 Glycine max
Glyma.05G231600 2.0kb downstream 2.0kb downstream 2762 true Chr05: 40912334-40915095 Glycine max
Glyma.05G231600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40913096-40915095 Glycine max
Glyma.05G231600 5.0kb upstream 5.0kb upstream 5762 true Chr05: 40907334-40913095 Glycine max
Glyma.05G231600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40907334-40912333 Glycine max
Glyma.05G231600 5.0kb downstream 5.0kb downstream 5762 true Chr05: 40912334-40918095 Glycine max
Glyma.05G231600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40913096-40918095 Glycine max
Glyma.05G231600 10.0kb upstream 10.0kb upstream 10762 true Chr05: 40902334-40913095 Glycine max
Glyma.05G231600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40902334-40912333 Glycine max
Glyma.05G231600 10.0kb downstream 10.0kb downstream 10762 true Chr05: 40912334-40923095 Glycine max
Glyma.05G231600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40913096-40923095 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313487 5265 Fabidae View MSA
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0383612 0.0 0.173489 Low Low
cufflinks 0.218002 0.0 0.87372 Low  
cufflinks 0.158554 0.0 0.642771 Low  
cufflinks 0.139051 0.0 0.567858 Low  
cufflinks 3.0359 0.0 10.7353   High
cufflinks 2.69885 0.0 9.62585    
cufflinks 4.65175 0.0 15.8547   High
cufflinks 0.404602 0.0 1.585    
cufflinks 1.48981 0.0 5.51092    
cufflinks 0.861        
cufflinks 0.298        
cufflinks 0.126        
cufflinks 3.872       High
cufflinks 6.079       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.435        
cufflinks 0.381        
cufflinks 0.302        
cufflinks 0.084     Low Low
cufflinks 0.467        
cufflinks 0.078       Low
cufflinks 0.598        
cufflinks 0.311        
cufflinks 0.153        
cufflinks 0.495        
cufflinks 0.255        

0 Strain