Gene : Glyma.05G224400 G. max Wm82.a2.v1
Defline:  (1 of 95) PF00642 - Zinc finger C-x8-C-x5-C-x3-H type (and similar) (zf-CCCH) Genomic Order:  2244
Name:  ? Glyma.05G224400 Secondary Identifier:  ? PAC:30527272
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G224400 0.5kb upstream 0.5kb upstream 2434 true Chr05: 40325845-40328278 Glycine max
Glyma.05G224400 0.5kb upstream 0.5kb upstream 500 false Chr05: 40327779-40328278 Glycine max
Glyma.05G224400 0.5kb downstream 0.5kb downstream 2434 true Chr05: 40325345-40327778 Glycine max
Glyma.05G224400 0.5kb downstream 0.5kb downstream 500 false Chr05: 40325345-40325844 Glycine max
Glyma.05G224400 1.0kb upstream 1.0kb upstream 2934 true Chr05: 40325845-40328778 Glycine max
Glyma.05G224400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40327779-40328778 Glycine max
Glyma.05G224400 1.0kb downstream 1.0kb downstream 2934 true Chr05: 40324845-40327778 Glycine max
Glyma.05G224400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40324845-40325844 Glycine max
Glyma.05G224400 2.0kb upstream 2.0kb upstream 3934 true Chr05: 40325845-40329778 Glycine max
Glyma.05G224400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40327779-40329778 Glycine max
Glyma.05G224400 2.0kb downstream 2.0kb downstream 3934 true Chr05: 40323845-40327778 Glycine max
Glyma.05G224400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40323845-40325844 Glycine max
Glyma.05G224400 5.0kb upstream 5.0kb upstream 6934 true Chr05: 40325845-40332778 Glycine max
Glyma.05G224400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40327779-40332778 Glycine max
Glyma.05G224400 5.0kb downstream 5.0kb downstream 6934 true Chr05: 40320845-40327778 Glycine max
Glyma.05G224400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40320845-40325844 Glycine max
Glyma.05G224400 10.0kb upstream 10.0kb upstream 11934 true Chr05: 40325845-40337778 Glycine max
Glyma.05G224400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40327779-40337778 Glycine max
Glyma.05G224400 10.0kb downstream 10.0kb downstream 11934 true Chr05: 40315845-40327778 Glycine max
Glyma.05G224400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40315845-40325844 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310889 5265 Fabidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.39439 0.0 22.8502    
cufflinks 20.0506 0.0 53.6017    
cufflinks 25.0846 0.0 67.4539 High High
cufflinks 15.9498 0.0 42.5535    
cufflinks 9.67619 0.0 26.0785    
cufflinks 2.6266 0.0 8.15088   Low
cufflinks 23.793 0.0 64.0732 High High
cufflinks 11.8024 0.0 31.6543    
cufflinks 7.86528 0.0 21.5081    
cufflinks 6.152        
cufflinks 39.839     High  
cufflinks 15.795     High  
cufflinks 1.723       Low
cufflinks 2.534       Low
cufflinks 71.056     High High
cufflinks 14.713     High  
cufflinks 8.881     High  
cufflinks 8.862     High  
cufflinks 38.684     High  
cufflinks 10.354     High  
cufflinks 67.872     High High
cufflinks 9.086     High  
cufflinks 7.057        
cufflinks 15.376     High  
cufflinks 14.992     High  
cufflinks 52.616     High High

0 Strain