Gene : Glyma.05G224700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31513:SF1 - GLYCINE-RICH PROTEIN Genomic Order:  2247
Name:  ? Glyma.05G224700 Secondary Identifier:  ? PAC:30523643
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G224700 0.5kb upstream 0.5kb upstream 11384 true Chr05: 40350505-40361888 Glycine max
Glyma.05G224700 0.5kb upstream 0.5kb upstream 500 false Chr05: 40350505-40351004 Glycine max
Glyma.05G224700 0.5kb downstream 0.5kb downstream 11384 true Chr05: 40351005-40362388 Glycine max
Glyma.05G224700 0.5kb downstream 0.5kb downstream 500 false Chr05: 40361889-40362388 Glycine max
Glyma.05G224700 1.0kb upstream 1.0kb upstream 11884 true Chr05: 40350005-40361888 Glycine max
Glyma.05G224700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40350005-40351004 Glycine max
Glyma.05G224700 1.0kb downstream 1.0kb downstream 11884 true Chr05: 40351005-40362888 Glycine max
Glyma.05G224700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40361889-40362888 Glycine max
Glyma.05G224700 2.0kb upstream 2.0kb upstream 12884 true Chr05: 40349005-40361888 Glycine max
Glyma.05G224700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40349005-40351004 Glycine max
Glyma.05G224700 2.0kb downstream 2.0kb downstream 12884 true Chr05: 40351005-40363888 Glycine max
Glyma.05G224700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40361889-40363888 Glycine max
Glyma.05G224700 5.0kb upstream 5.0kb upstream 15884 true Chr05: 40346005-40361888 Glycine max
Glyma.05G224700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40346005-40351004 Glycine max
Glyma.05G224700 5.0kb downstream 5.0kb downstream 15884 true Chr05: 40351005-40366888 Glycine max
Glyma.05G224700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40361889-40366888 Glycine max
Glyma.05G224700 10.0kb upstream 10.0kb upstream 20884 true Chr05: 40341005-40361888 Glycine max
Glyma.05G224700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40341005-40351004 Glycine max
Glyma.05G224700 10.0kb downstream 10.0kb downstream 20884 true Chr05: 40351005-40371888 Glycine max
Glyma.05G224700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40361889-40371888 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305302 5265 Fabidae View MSA
124073287 5270 Rosid View MSA
123741641 5271 Pentapetalae View MSA
122787770 5272 Eudicot View MSA
122043442 5273 Angiosperm View MSA
121344544 5274 Embryophyte View MSA
123380062 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.79742 0.0 16.9853    
cufflinks 2.34425 0.0 9.54876   Low
cufflinks 5.54871 0.0 21.592   High
cufflinks 4.73114 0.0 18.6888    
cufflinks 3.17256 0.0 11.8969    
cufflinks 3.49151 0.0 12.868    
cufflinks 2.19075 0.0 8.70798   Low
cufflinks 3.71771 0.0 11.6446    
cufflinks 3.75337 0.0 14.9974    
cufflinks 0.774        
cufflinks 1.804       High
cufflinks 1.002        
cufflinks 0.661       Low
cufflinks 0.496       Low
cufflinks 0.784        
cufflinks 0.989        
cufflinks 1.677       High
cufflinks 0.829        
cufflinks 0.815        
cufflinks 0.717        
cufflinks 1.333        
cufflinks 0.918        
cufflinks 0.998        
cufflinks 1.679       High
cufflinks 0.706        
cufflinks 1.409       High

0 Strain