Gene : Glyma.05G226700 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.1.1.60 - 2-hydroxy-3-oxopropionate reductase / Tartronate semialdehyde reductase Genomic Order:  2267
Name:  ? Glyma.05G226700 Secondary Identifier:  ? PAC:30526720
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G226700 0.5kb upstream 0.5kb upstream 2386 true Chr05: 40501715-40504100 Glycine max
Glyma.05G226700 0.5kb upstream 0.5kb upstream 500 false Chr05: 40503601-40504100 Glycine max
Glyma.05G226700 0.5kb downstream 0.5kb downstream 2386 true Chr05: 40501215-40503600 Glycine max
Glyma.05G226700 0.5kb downstream 0.5kb downstream 500 false Chr05: 40501215-40501714 Glycine max
Glyma.05G226700 1.0kb upstream 1.0kb upstream 2886 true Chr05: 40501715-40504600 Glycine max
Glyma.05G226700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40503601-40504600 Glycine max
Glyma.05G226700 1.0kb downstream 1.0kb downstream 2886 true Chr05: 40500715-40503600 Glycine max
Glyma.05G226700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40500715-40501714 Glycine max
Glyma.05G226700 2.0kb upstream 2.0kb upstream 3886 true Chr05: 40501715-40505600 Glycine max
Glyma.05G226700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40503601-40505600 Glycine max
Glyma.05G226700 2.0kb downstream 2.0kb downstream 3886 true Chr05: 40499715-40503600 Glycine max
Glyma.05G226700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40499715-40501714 Glycine max
Glyma.05G226700 5.0kb upstream 5.0kb upstream 6886 true Chr05: 40501715-40508600 Glycine max
Glyma.05G226700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40503601-40508600 Glycine max
Glyma.05G226700 5.0kb downstream 5.0kb downstream 6886 true Chr05: 40496715-40503600 Glycine max
Glyma.05G226700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40496715-40501714 Glycine max
Glyma.05G226700 10.0kb upstream 10.0kb upstream 11886 true Chr05: 40501715-40513600 Glycine max
Glyma.05G226700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40503601-40513600 Glycine max
Glyma.05G226700 10.0kb downstream 10.0kb downstream 11886 true Chr05: 40491715-40503600 Glycine max
Glyma.05G226700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40491715-40501714 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304045 5265 Fabidae View MSA
124063377 5270 Rosid View MSA
123736989 5271 Pentapetalae View MSA
122790221 5272 Eudicot View MSA
122043282 5273 Angiosperm View MSA
121346771 5274 Embryophyte View MSA
123380441 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.4935 0.0 73.7253 High  
cufflinks 19.9961 0.0 53.3512    
cufflinks 29.5626 0.0 79.2905 High  
cufflinks 37.194 0.0 101.068 High High
cufflinks 26.106 0.0 69.9976 High  
cufflinks 10.68 0.0 29.0223   Low
cufflinks 31.6557 0.0 85.4508 High  
cufflinks 22.8575 0.0 61.0097 High  
cufflinks 21.4648 0.0 57.2798 High  
cufflinks 7.699     High  
cufflinks 10.795     High  
cufflinks 11.182     High  
cufflinks 4.309       Low
cufflinks 6.287        
cufflinks 8.763     High  
cufflinks 8.184     High  
cufflinks 3.72       Low
cufflinks 14.688     High High
cufflinks 10.21     High  
cufflinks 10.569     High  
cufflinks 7.841     High  
cufflinks 9.67     High  
cufflinks 5.723       Low
cufflinks 10.522     High  
cufflinks 8.441     High  
cufflinks 11.443     High  

0 Strain