Gene : Glyma.05G218600 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11712//PTHR11712:SF283 - POLYKETIDE SYNTHASE-RELATED Genomic Order:  2186
Name:  ? Glyma.05G218600 Secondary Identifier:  ? PAC:30523887
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G218600 0.5kb upstream 0.5kb upstream 4995 true Chr05: 39829580-39834574 Glycine max
Glyma.05G218600 0.5kb upstream 0.5kb upstream 500 false Chr05: 39829580-39830079 Glycine max
Glyma.05G218600 0.5kb downstream 0.5kb downstream 4995 true Chr05: 39830080-39835074 Glycine max
Glyma.05G218600 0.5kb downstream 0.5kb downstream 500 false Chr05: 39834575-39835074 Glycine max
Glyma.05G218600 1.0kb upstream 1.0kb upstream 5495 true Chr05: 39829080-39834574 Glycine max
Glyma.05G218600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39829080-39830079 Glycine max
Glyma.05G218600 1.0kb downstream 1.0kb downstream 5495 true Chr05: 39830080-39835574 Glycine max
Glyma.05G218600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39834575-39835574 Glycine max
Glyma.05G218600 2.0kb upstream 2.0kb upstream 6495 true Chr05: 39828080-39834574 Glycine max
Glyma.05G218600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39828080-39830079 Glycine max
Glyma.05G218600 2.0kb downstream 2.0kb downstream 6495 true Chr05: 39830080-39836574 Glycine max
Glyma.05G218600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39834575-39836574 Glycine max
Glyma.05G218600 5.0kb upstream 5.0kb upstream 9495 true Chr05: 39825080-39834574 Glycine max
Glyma.05G218600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39825080-39830079 Glycine max
Glyma.05G218600 5.0kb downstream 5.0kb downstream 9495 true Chr05: 39830080-39839574 Glycine max
Glyma.05G218600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39834575-39839574 Glycine max
Glyma.05G218600 10.0kb upstream 10.0kb upstream 14495 true Chr05: 39820080-39834574 Glycine max
Glyma.05G218600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39820080-39830079 Glycine max
Glyma.05G218600 10.0kb downstream 10.0kb downstream 14495 true Chr05: 39830080-39844574 Glycine max
Glyma.05G218600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39834575-39844574 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791871 5273 Angiosperm View MSA
122303640 5265 Fabidae View MSA
124070381 5270 Rosid View MSA
123742517 5271 Pentapetalae View MSA
122794938 5272 Eudicot View MSA
121063147 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.399356 0.0 2.48321   Low
cufflinks 16.2859 0.0 57.6472   High
cufflinks 2.09163 0.0 9.25601    
cufflinks 6.55173 0.0 24.5446    
cufflinks 0.360798 0.0 2.30086   Low
cufflinks 3.56969 0.0 13.2535    
cufflinks 2.44121 0.0 10.459    
cufflinks 2.80819 0.0 11.3771    
cufflinks 0.305528 0.0 1.52007   Low
cufflinks 2.663        
cufflinks 0.022     Low Low
cufflinks 1.305        
cufflinks 0.146        
cufflinks 0.054     Low  
cufflinks 0.002     Low Low
cufflinks 1.526        
cufflinks 0.088        
cufflinks 4.762       High
cufflinks 8.067     High High
cufflinks 0.496        
cufflinks 0.049     Low  
cufflinks 0.859        
cufflinks 1.618        
cufflinks 0.024     Low Low
cufflinks 1.021        
cufflinks 0.048     Low  

0 Strain