Gene : Glyma.05G220100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10108:SF801 - METHYLTRANSFERASE PMT18-RELATED Genomic Order:  2201
Name:  ? Glyma.05G220100 Secondary Identifier:  ? PAC:30527531
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G220100 0.5kb upstream 0.5kb upstream 6024 true Chr05: 39949999-39956022 Glycine max
Glyma.05G220100 0.5kb upstream 0.5kb upstream 500 false Chr05: 39949999-39950498 Glycine max
Glyma.05G220100 0.5kb downstream 0.5kb downstream 6024 true Chr05: 39950499-39956522 Glycine max
Glyma.05G220100 0.5kb downstream 0.5kb downstream 500 false Chr05: 39956023-39956522 Glycine max
Glyma.05G220100 1.0kb upstream 1.0kb upstream 6524 true Chr05: 39949499-39956022 Glycine max
Glyma.05G220100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39949499-39950498 Glycine max
Glyma.05G220100 1.0kb downstream 1.0kb downstream 6524 true Chr05: 39950499-39957022 Glycine max
Glyma.05G220100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39956023-39957022 Glycine max
Glyma.05G220100 2.0kb upstream 2.0kb upstream 7524 true Chr05: 39948499-39956022 Glycine max
Glyma.05G220100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39948499-39950498 Glycine max
Glyma.05G220100 2.0kb downstream 2.0kb downstream 7524 true Chr05: 39950499-39958022 Glycine max
Glyma.05G220100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39956023-39958022 Glycine max
Glyma.05G220100 5.0kb upstream 5.0kb upstream 10524 true Chr05: 39945499-39956022 Glycine max
Glyma.05G220100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39945499-39950498 Glycine max
Glyma.05G220100 5.0kb downstream 5.0kb downstream 10524 true Chr05: 39950499-39961022 Glycine max
Glyma.05G220100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39956023-39961022 Glycine max
Glyma.05G220100 10.0kb upstream 10.0kb upstream 15524 true Chr05: 39940499-39956022 Glycine max
Glyma.05G220100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39940499-39950498 Glycine max
Glyma.05G220100 10.0kb downstream 10.0kb downstream 15524 true Chr05: 39950499-39966022 Glycine max
Glyma.05G220100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39956023-39966022 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300566 5265 Fabidae View MSA
124063763 5270 Rosid View MSA
123736369 5271 Pentapetalae View MSA
122786286 5272 Eudicot View MSA
122046035 5273 Angiosperm View MSA
121348774 5274 Embryophyte View MSA
123381009 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0189644 0.0 0.085224 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 3.31893 0.0 11.9797   High
cufflinks 0.00511249 0.0 0.0367743 Low  
cufflinks 0.0408061 0.0 0.166991 Low  
cufflinks 0.0177458 0.0 0.0793461 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00938875 0.0 0.0485952 Low  
cufflinks 0.381976 0.0 1.80506    
cufflinks 0.02     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.37       High
cufflinks 0.007     Low  
cufflinks 0.001     Low Low
cufflinks 0.044     Low  
cufflinks 0.012     Low  
cufflinks 0.008     Low  
cufflinks 3.348       High
cufflinks 0.004     Low  
cufflinks 0.014     Low  
cufflinks 0.002     Low  
cufflinks 0.007     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.002     Low  

0 Strain