Gene : Glyma.05G221500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10390 - HOMEOBOX PROTEIN SIX Genomic Order:  2215
Name:  ? Glyma.05G221500 Secondary Identifier:  ? PAC:30524544
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G221500 0.5kb upstream 0.5kb upstream 9737 true Chr05: 40096203-40105939 Glycine max
Glyma.05G221500 0.5kb upstream 0.5kb upstream 500 false Chr05: 40096203-40096702 Glycine max
Glyma.05G221500 0.5kb downstream 0.5kb downstream 9737 true Chr05: 40096703-40106439 Glycine max
Glyma.05G221500 0.5kb downstream 0.5kb downstream 500 false Chr05: 40105940-40106439 Glycine max
Glyma.05G221500 1.0kb upstream 1.0kb upstream 10237 true Chr05: 40095703-40105939 Glycine max
Glyma.05G221500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40095703-40096702 Glycine max
Glyma.05G221500 1.0kb downstream 1.0kb downstream 10237 true Chr05: 40096703-40106939 Glycine max
Glyma.05G221500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40105940-40106939 Glycine max
Glyma.05G221500 2.0kb upstream 2.0kb upstream 11237 true Chr05: 40094703-40105939 Glycine max
Glyma.05G221500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40094703-40096702 Glycine max
Glyma.05G221500 2.0kb downstream 2.0kb downstream 11237 true Chr05: 40096703-40107939 Glycine max
Glyma.05G221500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40105940-40107939 Glycine max
Glyma.05G221500 5.0kb upstream 5.0kb upstream 14237 true Chr05: 40091703-40105939 Glycine max
Glyma.05G221500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40091703-40096702 Glycine max
Glyma.05G221500 5.0kb downstream 5.0kb downstream 14237 true Chr05: 40096703-40110939 Glycine max
Glyma.05G221500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40105940-40110939 Glycine max
Glyma.05G221500 10.0kb upstream 10.0kb upstream 19237 true Chr05: 40086703-40105939 Glycine max
Glyma.05G221500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40086703-40096702 Glycine max
Glyma.05G221500 10.0kb downstream 10.0kb downstream 19237 true Chr05: 40096703-40115939 Glycine max
Glyma.05G221500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40105940-40115939 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306429 5265 Fabidae View MSA
124073562 5270 Rosid View MSA
123738423 5271 Pentapetalae View MSA
122790469 5272 Eudicot View MSA
122046337 5273 Angiosperm View MSA
121310590 5274 Embryophyte View MSA
123427491 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.4247 0.0 28.8075   High
cufflinks 3.49864 0.0 12.965    
cufflinks 3.17372 0.0 11.8039    
cufflinks 3.98728 0.0 14.4112    
cufflinks 3.89113 0.0 14.2199    
cufflinks 1.42919 0.0 4.42455   Low
cufflinks 4.57871 0.0 14.0048    
cufflinks 3.75324 0.0 13.7342    
cufflinks 3.36441 0.0 12.4232    
cufflinks 0.431        
cufflinks 0.055       Low
cufflinks 1.338       High
cufflinks 0.995        
cufflinks 1.431       High
cufflinks 0.15       Low
cufflinks 0.661        
cufflinks 0.308        
cufflinks 1.178        
cufflinks 1.084        
cufflinks 0.568        
cufflinks 0.128       Low
cufflinks 0.614        
cufflinks 1.182        
cufflinks 0.101       Low
cufflinks 0.612        
cufflinks 0.189        

0 Strain