Gene : Glyma.05G221600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24220:SF85 - ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC Genomic Order:  2216
Name:  ? Glyma.05G221600 Secondary Identifier:  ? PAC:30525800
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.05G221600 0.5kb upstream 0.5kb upstream 4056 true Chr05: 40107183-40111238 Glycine max
Glyma.05G221600 0.5kb upstream 0.5kb upstream 500 false Chr05: 40110739-40111238 Glycine max
Glyma.05G221600 0.5kb downstream 0.5kb downstream 4056 true Chr05: 40106683-40110738 Glycine max
Glyma.05G221600 0.5kb downstream 0.5kb downstream 500 false Chr05: 40106683-40107182 Glycine max
Glyma.05G221600 1.0kb upstream 1.0kb upstream 4556 true Chr05: 40107183-40111738 Glycine max
Glyma.05G221600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40110739-40111738 Glycine max
Glyma.05G221600 1.0kb downstream 1.0kb downstream 4556 true Chr05: 40106183-40110738 Glycine max
Glyma.05G221600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40106183-40107182 Glycine max
Glyma.05G221600 2.0kb upstream 2.0kb upstream 5556 true Chr05: 40107183-40112738 Glycine max
Glyma.05G221600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40110739-40112738 Glycine max
Glyma.05G221600 2.0kb downstream 2.0kb downstream 5556 true Chr05: 40105183-40110738 Glycine max
Glyma.05G221600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40105183-40107182 Glycine max
Glyma.05G221600 5.0kb upstream 5.0kb upstream 8556 true Chr05: 40107183-40115738 Glycine max
Glyma.05G221600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40110739-40115738 Glycine max
Glyma.05G221600 5.0kb downstream 5.0kb downstream 8556 true Chr05: 40102183-40110738 Glycine max
Glyma.05G221600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40102183-40107182 Glycine max
Glyma.05G221600 10.0kb upstream 10.0kb upstream 13556 true Chr05: 40107183-40120738 Glycine max
Glyma.05G221600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40110739-40120738 Glycine max
Glyma.05G221600 10.0kb downstream 10.0kb downstream 13556 true Chr05: 40097183-40110738 Glycine max
Glyma.05G221600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40097183-40107182 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313549 5265 Fabidae View MSA
124064289 5270 Rosid View MSA
123737216 5271 Pentapetalae View MSA
122791638 5272 Eudicot View MSA
122043551 5273 Angiosperm View MSA
121344782 5274 Embryophyte View MSA
123425394 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.1704 0.0 102.045 High High
cufflinks 13.226 0.0 50.2786    
cufflinks 11.7129 0.0 45.3899    
cufflinks 11.6726 0.0 45.113    
cufflinks 7.90721 0.0 29.9497   Low
cufflinks 9.3286 0.0 37.8984    
cufflinks 17.9414 0.0 66.0834    
cufflinks 11.2383 0.0 43.9332    
cufflinks 8.67944 0.0 35.8894    
cufflinks 1.154        
cufflinks 0.866        
cufflinks 1.243        
cufflinks 1.253        
cufflinks 1.141        
cufflinks 0.38       Low
cufflinks 2.531       High
cufflinks 0.486       Low
cufflinks 1.224        
cufflinks 1.635        
cufflinks 2.366       High
cufflinks 0.778        
cufflinks 2.323       High
cufflinks 2.658       High
cufflinks 1.065        
cufflinks 2.516       High
cufflinks 0.726        

0 Strain