Gene : Glyma.06G013400 G. max Wm82.a2.v1
Defline:  (1 of 26) PF03181 - BURP domain (BURP) Genomic Order:  134
Name:  ? Glyma.06G013400 Secondary Identifier:  ? PAC:30549415
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G013400 0.5kb upstream 0.5kb upstream 2233 true Chr06: 1003203-1005435 Glycine max
Glyma.06G013400 0.5kb upstream 0.5kb upstream 500 false Chr06: 1003203-1003702 Glycine max
Glyma.06G013400 0.5kb downstream 0.5kb downstream 2233 true Chr06: 1003703-1005935 Glycine max
Glyma.06G013400 0.5kb downstream 0.5kb downstream 500 false Chr06: 1005436-1005935 Glycine max
Glyma.06G013400 1.0kb upstream 1.0kb upstream 2733 true Chr06: 1002703-1005435 Glycine max
Glyma.06G013400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1002703-1003702 Glycine max
Glyma.06G013400 1.0kb downstream 1.0kb downstream 2733 true Chr06: 1003703-1006435 Glycine max
Glyma.06G013400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1005436-1006435 Glycine max
Glyma.06G013400 2.0kb upstream 2.0kb upstream 3733 true Chr06: 1001703-1005435 Glycine max
Glyma.06G013400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1001703-1003702 Glycine max
Glyma.06G013400 2.0kb downstream 2.0kb downstream 3733 true Chr06: 1003703-1007435 Glycine max
Glyma.06G013400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1005436-1007435 Glycine max
Glyma.06G013400 5.0kb upstream 5.0kb upstream 6733 true Chr06: 998703-1005435 Glycine max
Glyma.06G013400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 998703-1003702 Glycine max
Glyma.06G013400 5.0kb downstream 5.0kb downstream 6733 true Chr06: 1003703-1010435 Glycine max
Glyma.06G013400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1005436-1010435 Glycine max
Glyma.06G013400 10.0kb upstream 10.0kb upstream 11733 true Chr06: 993703-1005435 Glycine max
Glyma.06G013400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 993703-1003702 Glycine max
Glyma.06G013400 10.0kb downstream 10.0kb downstream 11733 true Chr06: 1003703-1015435 Glycine max
Glyma.06G013400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1005436-1015435 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313235 5265 Fabidae View MSA
124069569 5270 Rosid View MSA
123746608 5271 Pentapetalae View MSA
122797673 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.99822 0.0 12.1604    
cufflinks 0.230467 0.0 0.887583 Low Low
cufflinks 5.66187 0.0 16.3682    
cufflinks 8.30915 0.0 23.0711    
cufflinks 20.7759 0.0 55.4277 High  
cufflinks 146.58 0.0 479.954 High High
cufflinks 16.9151 0.0 45.2238    
cufflinks 6.1877 0.0 17.6871    
cufflinks 22.7539 0.0 60.7402 High  
cufflinks 6.603        
cufflinks 91.842     High High
cufflinks 3.321        
cufflinks 30.146     High  
cufflinks 22.808     High  
cufflinks 4.84        
cufflinks 4.116        
cufflinks 23.493     High  
cufflinks 1.08       Low
cufflinks 0.304       Low
cufflinks 4.237        
cufflinks 92.225     High High
cufflinks 3.818        
cufflinks 1.113       Low
cufflinks 125.38     High High
cufflinks 6.348        
cufflinks 64.805     High High

0 Strain