Gene : Glyma.06G016000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18966//PTHR18966:SF186 - IONOTROPIC GLUTAMATE RECEPTOR Genomic Order:  160
Name:  ? Glyma.06G016000 Secondary Identifier:  ? PAC:30549729
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G016000 0.5kb upstream 0.5kb upstream 5717 true Chr06: 1193448-1199164 Glycine max
Glyma.06G016000 0.5kb upstream 0.5kb upstream 500 false Chr06: 1198665-1199164 Glycine max
Glyma.06G016000 0.5kb downstream 0.5kb downstream 5717 true Chr06: 1192948-1198664 Glycine max
Glyma.06G016000 0.5kb downstream 0.5kb downstream 500 false Chr06: 1192948-1193447 Glycine max
Glyma.06G016000 1.0kb upstream 1.0kb upstream 6217 true Chr06: 1193448-1199664 Glycine max
Glyma.06G016000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1198665-1199664 Glycine max
Glyma.06G016000 1.0kb downstream 1.0kb downstream 6217 true Chr06: 1192448-1198664 Glycine max
Glyma.06G016000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1192448-1193447 Glycine max
Glyma.06G016000 2.0kb upstream 2.0kb upstream 7217 true Chr06: 1193448-1200664 Glycine max
Glyma.06G016000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1198665-1200664 Glycine max
Glyma.06G016000 2.0kb downstream 2.0kb downstream 7217 true Chr06: 1191448-1198664 Glycine max
Glyma.06G016000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1191448-1193447 Glycine max
Glyma.06G016000 5.0kb upstream 5.0kb upstream 10217 true Chr06: 1193448-1203664 Glycine max
Glyma.06G016000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1198665-1203664 Glycine max
Glyma.06G016000 5.0kb downstream 5.0kb downstream 10217 true Chr06: 1188448-1198664 Glycine max
Glyma.06G016000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1188448-1193447 Glycine max
Glyma.06G016000 10.0kb upstream 10.0kb upstream 15217 true Chr06: 1193448-1208664 Glycine max
Glyma.06G016000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1198665-1208664 Glycine max
Glyma.06G016000 10.0kb downstream 10.0kb downstream 15217 true Chr06: 1183448-1198664 Glycine max
Glyma.06G016000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1183448-1193447 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308780 5265 Fabidae View MSA
124061746 5270 Rosid View MSA
123745349 5271 Pentapetalae View MSA
122785834 5272 Eudicot View MSA
122045800 5273 Angiosperm View MSA
121348236 5274 Embryophyte View MSA
123428796 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.08404 0.0 15.2092    
cufflinks 2.81914 0.0 11.6005   Low
cufflinks 12.2207 0.0 44.969   High
cufflinks 5.10524 0.0 20.3595    
cufflinks 2.98029 0.0 10.318   Low
cufflinks 6.76433 0.0 23.328    
cufflinks 3.93514 0.0 14.8049    
cufflinks 4.3135 0.0 13.6565    
cufflinks 5.11797 0.0 18.2754    
cufflinks 1.214        
cufflinks 4.628       High
cufflinks 2.664        
cufflinks 0.951       Low
cufflinks 0.567       Low
cufflinks 5.74     High High
cufflinks 1.606        
cufflinks 1.437        
cufflinks 1.511        
cufflinks 1.085        
cufflinks 1.881        
cufflinks 2.18        
cufflinks 1.904        
cufflinks 1.866        
cufflinks 4.622       High
cufflinks 1.697        
cufflinks 3.098        

0 Strain