Gene : Glyma.06G017700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10796 - PATCHED-RELATED Genomic Order:  177
Name:  ? Glyma.06G017700 Secondary Identifier:  ? PAC:30553148
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G017700 0.5kb upstream 0.5kb upstream 16203 true Chr06: 1317598-1333800 Glycine max
Glyma.06G017700 0.5kb upstream 0.5kb upstream 500 false Chr06: 1317598-1318097 Glycine max
Glyma.06G017700 0.5kb downstream 0.5kb downstream 16203 true Chr06: 1318098-1334300 Glycine max
Glyma.06G017700 0.5kb downstream 0.5kb downstream 500 false Chr06: 1333801-1334300 Glycine max
Glyma.06G017700 1.0kb upstream 1.0kb upstream 16703 true Chr06: 1317098-1333800 Glycine max
Glyma.06G017700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1317098-1318097 Glycine max
Glyma.06G017700 1.0kb downstream 1.0kb downstream 16703 true Chr06: 1318098-1334800 Glycine max
Glyma.06G017700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1333801-1334800 Glycine max
Glyma.06G017700 2.0kb upstream 2.0kb upstream 17703 true Chr06: 1316098-1333800 Glycine max
Glyma.06G017700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1316098-1318097 Glycine max
Glyma.06G017700 2.0kb downstream 2.0kb downstream 17703 true Chr06: 1318098-1335800 Glycine max
Glyma.06G017700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1333801-1335800 Glycine max
Glyma.06G017700 5.0kb upstream 5.0kb upstream 20703 true Chr06: 1313098-1333800 Glycine max
Glyma.06G017700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1313098-1318097 Glycine max
Glyma.06G017700 5.0kb downstream 5.0kb downstream 20703 true Chr06: 1318098-1338800 Glycine max
Glyma.06G017700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1333801-1338800 Glycine max
Glyma.06G017700 10.0kb upstream 10.0kb upstream 25703 true Chr06: 1308098-1333800 Glycine max
Glyma.06G017700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1308098-1318097 Glycine max
Glyma.06G017700 10.0kb downstream 10.0kb downstream 25703 true Chr06: 1318098-1343800 Glycine max
Glyma.06G017700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1333801-1343800 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312597 5265 Fabidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.16 0.0 36.0743    
cufflinks 7.07293 0.0 21.9697    
cufflinks 6.83098 0.0 23.7338    
cufflinks 14.6525 0.0 53.3864    
cufflinks 7.56392 0.0 26.2111    
cufflinks 2.96904 0.0 10.2406   Low
cufflinks 13.4254 0.0 49.0103    
cufflinks 18.1438 0.0 68.1454   High
cufflinks 7.15637 0.0 24.7476    
cufflinks 1.366        
cufflinks 0.175       Low
cufflinks 1.298        
cufflinks 1.265        
cufflinks 1.193        
cufflinks 0.268       Low
cufflinks 2.535        
cufflinks 0.85        
cufflinks 3.014       High
cufflinks 1.544        
cufflinks 3.018       High
cufflinks 0.275       Low
cufflinks 2.424        
cufflinks 2.035        
cufflinks 0.362       Low
cufflinks 3.103       High
cufflinks 0.37       Low

0 Strain