Protein Family : Patched family protein 123429105

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  111

111 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30170.t000779 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) R. communis v0.1 14086   30170: 4159782-4173867
Cucsa.272140 (1 of 1) PF02460//PF16414 - Patched family (Patched) // Niemann-Pick C1 N terminus (NPC1_N) C. sativus v1.0 15011   scaffold02500: 819260-834270
orange1.1g000762m.g (1 of 2) PTHR10796 - PATCHED-RELATED C. sinensis v1.1 15722   scaffold00002: 4579424-4595145
AT4G38350 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) A. thaliana TAIR10 8786   Chr4: 17958177-17966962
AT1G42470 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) A. thaliana TAIR10 8222   Chr1: 15926987-15935208
Thhalv10024233m.g (1 of 2) PTHR10796 - PATCHED-RELATED E. salsugineum v1.0 8318   scaffold_1: 71066-79383
Thhalv10016155m.g (1 of 2) PTHR10796 - PATCHED-RELATED E. salsugineum v1.0 8499   scaffold_10: 3109240-3117738
Ciclev10000039m.g (1 of 3) PTHR10796 - PATCHED-RELATED C. clementina v1.0 15623   scaffold_5: 42718715-42734337
Ciclev10030120m.g (1 of 3) PTHR10796 - PATCHED-RELATED C. clementina v1.0 12778   scaffold_8: 250096-262873
Lus10016019.g (1 of 1) PTHR10796 - PATCHED-RELATED L. usitatissimum v1.0 10951   scaffold172: 265397-276347
Gorai.002G115700 (1 of 2) PTHR10796 - PATCHED-RELATED G. raimondii v2.1 13743   Chr02: 16427588-16441330
Gorai.002G206800 (1 of 2) PTHR10796 - PATCHED-RELATED G. raimondii v2.1 22355   Chr02: 55275793-55298147
estExt_Genewise1Plus.C_20431 (1 of 1) PTHR10796 - PATCHED-RELATED C. subellipsoidea C-169 v2.0 8069   scaffold_2: 2166861-2174929
MicpuC2.fgenesh1_pg.C_scaffold_11000130 (1 of 6) PTHR10796 - PATCHED-RELATED M. pusilla CCMP1545 v3.0 3081   scaffold_11: 465430-468510
e_gw1.14.123.1 (1 of 1) PTHR10796//PTHR10796:SF123 - PATCHED-RELATED M. pusilla CCMP1545 v3.0 2667   scaffold_14: 448840-451506
fgenesh2_pg.C_Chr_08000330 (1 of 2) KOG1934 - Predicted membrane protein (patched superfamily) M. sp RCC299 v3.0 2688   Chr_08: 1135840-1138527
fgenesh2_pg.C_Chr_15000137 (1 of 1) PTHR10796//PTHR10796:SF123 - PATCHED-RELATED M. sp RCC299 v3.0 2577   Chr_15: 405507-408083
eugene.1500010163 (1 of 1) PTHR10796//PTHR10796:SF123 - PATCHED-RELATED O. lucimarinus v2.0 2518   Chr_15: 265484-268001
Thecc1EG006451 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) T. cacao v1.1 16997   scaffold_2: 2271174-2288170
Thecc1EG034394 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) T. cacao v1.1 16472   scaffold_8: 2750937-2767408
Migut.C00393 (1 of 1) PTHR10796 - PATCHED-RELATED M. guttatus v2.0 10250   scaffold_3: 9572799-9583048
Araha.2147s0002 (1 of 2) PTHR10796 - PATCHED-RELATED A. halleri v1.1 8376   Scaffold2147: 14016-22391
Araha.48675s0007 (1 of 2) PTHR10796 - PATCHED-RELATED A. halleri v1.1 8642   Scaffold48675: 15575-24216
Cagra.1383s0022 (1 of 2) PTHR10796 - PATCHED-RELATED C. grandiflora v1.1 9113   Scaffold1383: 65005-74117
Cagra.6119s0004 (1 of 2) PTHR10796 - PATCHED-RELATED C. grandiflora v1.1 7849   Scaffold6119: 18106-25954
Glyma.06G017700 (1 of 4) PTHR10796 - PATCHED-RELATED G. max Wm82.a2.v1 15703   Chr06: 1318098-1333800
Glyma.14G001500 (1 of 4) PTHR10796 - PATCHED-RELATED G. max Wm82.a2.v1 39896   Chr14: 160587-200482
Glyma.02G310900 (1 of 4) PTHR10796 - PATCHED-RELATED G. max Wm82.a2.v1 46974   Chr02: 48392067-48439040
Glyma.04G017300 (1 of 4) PTHR10796 - PATCHED-RELATED G. max Wm82.a2.v1 17339   Chr04: 1330467-1347805
Brara.G01340 (1 of 3) PTHR10796 - PATCHED-RELATED B. rapa FPsc v1.3 8240   A07: 13931179-13939418

111 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30170.m014367 R. communis v0.1 123429105 Patched family protein 1 5275 Viridiplantae
AT4G38350.2 A. thaliana TAIR10 123429105 Patched family protein 2 5275 Viridiplantae
Gorai.002G115700.1 G. raimondii v2.1 123429105 Patched family protein 2 5275 Viridiplantae
163785 M. pusilla CCMP1545 v3.0 123429105 Patched family protein 2 5275 Viridiplantae
Migut.C00393.1.p M. guttatus v2.0 123429105 Patched family protein 1 5275 Viridiplantae
Glyma.14G001500.1.p G. max Wm82.a2.v1 123429105 Patched family protein 4 5275 Viridiplantae
Glyma.06G017700.1.p G. max Wm82.a2.v1 123429105 Patched family protein 4 5275 Viridiplantae
Brara.D01673.1.p B. rapa FPsc v1.3 123429105 Patched family protein 3 5275 Viridiplantae
Bostr.12302s0003.1.p B. stricta v1.2 123429105 Patched family protein 2 5275 Viridiplantae
Cre02.g093500.t1.2 C. reinhardtii v5.6 123429105 Patched family protein 3 5275 Viridiplantae
Cre12.g496350.t1.2 C. reinhardtii v5.6 123429105 Patched family protein 3 5275 Viridiplantae
Cre12.g550900.t1.2 C. reinhardtii v5.6 123429105 Patched family protein 3 5275 Viridiplantae
Medtr3g115450.1 M. truncatula Mt4.0v1 123429105 Patched family protein 2 5275 Viridiplantae
SapurV1A.0266s0380.1.p S. purpurea v1.0 123429105 Patched family protein 3 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00044.188 A. trichopoda v1.0 123429105 Patched family protein 1 5275 Viridiplantae
Traes_2AL_2F5D5C19A.1 T. aestivum v2.2 123429105 Patched family protein 1 5275 Viridiplantae
Eucgr.F01780.1.p E. grandis v2.0 123429105 Patched family protein 2 5275 Viridiplantae
Eucgr.I01521.1.p E. grandis v2.0 123429105 Patched family protein 2 5275 Viridiplantae
GSMUA_Achr11P22390_001 M. acuminata v1 123429105 Patched family protein 1 5275 Viridiplantae
Kalax.0817s0006.1.p K. laxiflora v1.1 123429105 Patched family protein 4 5275 Viridiplantae
Kalax.0131s0064.1.p K. laxiflora v1.1 123429105 Patched family protein 4 5275 Viridiplantae
Sphfalx0027s0086.1.p S. fallax v0.5 123429105 Patched family protein 2 5275 Viridiplantae
Sphfalx0107s0030.1.p S. fallax v0.5 123429105 Patched family protein 2 5275 Viridiplantae
Seita.7G199400.1.p S. italica v2.2 123429105 Patched family protein 1 5275 Viridiplantae
Bradi5g18407.2.p B. distachyon v3.1 123429105 Patched family protein 1 5275 Viridiplantae
Brast09G172300.1.p B. stacei v1.1 123429105 Patched family protein 1 5275 Viridiplantae
Pp3c4_3140V3.1.p P. patens v3.3 123429105 Patched family protein 4 5275 Viridiplantae
Pp3c2_3460V3.1.p P. patens v3.3 123429105 Patched family protein 4 5275 Viridiplantae
Pp3c3_37390V3.1.p P. patens v3.3 123429105 Patched family protein 4 5275 Viridiplantae
Pp3c8_1540V3.1.p P. patens v3.3 123429105 Patched family protein 4 5275 Viridiplantae