Gene : AT4G38350 A. thaliana TAIR10
Defline:  (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) Genomic Order:  3941
Name:  ? AT4G38350 Secondary Identifier:  ? PAC:19647620
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G38350 0.5kb upstream 0.5kb upstream 9286 true Chr4: 17958177-17967462 Arabidopsis thaliana
AT4G38350 0.5kb upstream 0.5kb upstream 500 false Chr4: 17966963-17967462 Arabidopsis thaliana
AT4G38350 0.5kb downstream 0.5kb downstream 9286 true Chr4: 17957677-17966962 Arabidopsis thaliana
AT4G38350 0.5kb downstream 0.5kb downstream 500 false Chr4: 17957677-17958176 Arabidopsis thaliana
AT4G38350 1.0kb upstream 1.0kb upstream 9786 true Chr4: 17958177-17967962 Arabidopsis thaliana
AT4G38350 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17966963-17967962 Arabidopsis thaliana
AT4G38350 1.0kb downstream 1.0kb downstream 9786 true Chr4: 17957177-17966962 Arabidopsis thaliana
AT4G38350 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17957177-17958176 Arabidopsis thaliana
AT4G38350 2.0kb upstream 2.0kb upstream 10786 true Chr4: 17958177-17968962 Arabidopsis thaliana
AT4G38350 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17966963-17968962 Arabidopsis thaliana
AT4G38350 2.0kb downstream 2.0kb downstream 10786 true Chr4: 17956177-17966962 Arabidopsis thaliana
AT4G38350 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17956177-17958176 Arabidopsis thaliana
AT4G38350 5.0kb upstream 5.0kb upstream 13786 true Chr4: 17958177-17971962 Arabidopsis thaliana
AT4G38350 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17966963-17971962 Arabidopsis thaliana
AT4G38350 5.0kb downstream 5.0kb downstream 13786 true Chr4: 17953177-17966962 Arabidopsis thaliana
AT4G38350 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17953177-17958176 Arabidopsis thaliana
AT4G38350 10.0kb upstream 10.0kb upstream 18786 true Chr4: 17958177-17976962 Arabidopsis thaliana
AT4G38350 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17966963-17976962 Arabidopsis thaliana
AT4G38350 10.0kb downstream 10.0kb downstream 18786 true Chr4: 17948177-17966962 Arabidopsis thaliana
AT4G38350 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17948177-17958176 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377308 5261 Brassicaceae View MSA
123834018 5264 Brassicales-Malvales View MSA
124346774 5266 SBM View MSA
124251658 5268 Malvidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.768        
cufflinks 9.403        
cufflinks 4.504        
cufflinks 9.711       High
cufflinks 4.432        
cufflinks 8.836        

0 Strain