Protein Family : Patched family protein 124251658

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  35

35 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30170.t000779 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) R. communis v0.1 14086   30170: 4159782-4173867
orange1.1g000762m.g (1 of 2) PTHR10796 - PATCHED-RELATED C. sinensis v1.1 15722   scaffold00002: 4579424-4595145
AT4G38350 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) A. thaliana TAIR10 8786   Chr4: 17958177-17966962
AT1G42470 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) A. thaliana TAIR10 8222   Chr1: 15926987-15935208
Thhalv10024233m.g (1 of 2) PTHR10796 - PATCHED-RELATED E. salsugineum v1.0 8318   scaffold_1: 71066-79383
Thhalv10016155m.g (1 of 2) PTHR10796 - PATCHED-RELATED E. salsugineum v1.0 8499   scaffold_10: 3109240-3117738
Ciclev10000039m.g (1 of 3) PTHR10796 - PATCHED-RELATED C. clementina v1.0 15623   scaffold_5: 42718715-42734337
Lus10016019.g (1 of 1) PTHR10796 - PATCHED-RELATED L. usitatissimum v1.0 10951   scaffold172: 265397-276347
Gorai.002G115700 (1 of 2) PTHR10796 - PATCHED-RELATED G. raimondii v2.1 13743   Chr02: 16427588-16441330
Gorai.002G206800 (1 of 2) PTHR10796 - PATCHED-RELATED G. raimondii v2.1 22355   Chr02: 55275793-55298147
Thecc1EG006451 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) T. cacao v1.1 16997   scaffold_2: 2271174-2288170
Thecc1EG034394 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) T. cacao v1.1 16472   scaffold_8: 2750937-2767408
Araha.2147s0002 (1 of 2) PTHR10796 - PATCHED-RELATED A. halleri v1.1 8376   Scaffold2147: 14016-22391
Araha.48675s0007 (1 of 2) PTHR10796 - PATCHED-RELATED A. halleri v1.1 8642   Scaffold48675: 15575-24216
Cagra.1383s0022 (1 of 2) PTHR10796 - PATCHED-RELATED C. grandiflora v1.1 9113   Scaffold1383: 65005-74117
Cagra.6119s0004 (1 of 2) PTHR10796 - PATCHED-RELATED C. grandiflora v1.1 7849   Scaffold6119: 18106-25954
Brara.G01340 (1 of 3) PTHR10796 - PATCHED-RELATED B. rapa FPsc v1.3 8240   A07: 13931179-13939418
Brara.D01673 (1 of 3) PTHR10796 - PATCHED-RELATED B. rapa FPsc v1.3 8541   A04: 14651713-14660253
Bostr.12302s0003 (1 of 2) PTHR10796 - PATCHED-RELATED B. stricta v1.2 8963   Scaffold12302: 46409-55371
Bostr.25542s0021 (1 of 2) PTHR10796 - PATCHED-RELATED B. stricta v1.2 9235   Scaffold25542: 74694-83928
SapurV1A.0374s0250 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) S. purpurea v1.0 14590   chr09: 12419640-12434229
SapurV1A.0016s0640 (1 of 3) PTHR10796 - PATCHED-RELATED S. purpurea v1.0 14064   chr02: 713837-727900
SapurV1A.0266s0380 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) S. purpurea v1.0 13085   chr05: 22499182-22512266
Manes.05G130900 (1 of 3) PTHR10796 - PATCHED-RELATED M. esculenta v6.1 19395   Chromosome05: 16094045-16113439
Manes.18G004200 (1 of 3) PTHR10796 - PATCHED-RELATED M. esculenta v6.1 18632   Chromosome18: 459353-477984
AL1G51340 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) A. lyrata v2.1 9204   scaffold_1: 21610948-21620151
AL7G10220 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) A. lyrata v2.1 8697   scaffold_7: 72645-81341
Potri.002G009600 (1 of 3) K12385 - Niemann-Pick C1 protein (NPC1) P. trichocarpa v3.1 13572   Chr02: 544633-558204
Potri.005G251800 (1 of 3) K12385 - Niemann-Pick C1 protein (NPC1) P. trichocarpa v3.1 13274   Chr05: 25378586-25391859
Potri.009G167000 (1 of 2) K12385 - Niemann-Pick C1 protein (NPC1) P. trichocarpa v3.1 15411   Chr09: 12721040-12736450

35 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30170.m014367 R. communis v0.1 124251658 Patched family protein 1 5268 Malvidae
AT4G38350.2 A. thaliana TAIR10 124251658 Patched family protein 2 5268 Malvidae
Araha.48675s0007.1.p A. halleri v1.1 124251658 Patched family protein 2 5268 Malvidae
Brara.D01673.1.p B. rapa FPsc v1.3 124251658 Patched family protein 2 5268 Malvidae
Bostr.12302s0003.1.p B. stricta v1.2 124251658 Patched family protein 2 5268 Malvidae
SapurV1A.0266s0380.1.p S. purpurea v1.0 124251658 Patched family protein 3 5268 Malvidae
Potri.002G009600.2.p P. trichocarpa v3.1 124251658 Patched family protein 3 5268 Malvidae
Potri.005G251800.1.p P. trichocarpa v3.1 124251658 Patched family protein 3 5268 Malvidae
Carub.0001s3427.1.p C. rubella v1.1 124251658 Patched family protein 2 5268 Malvidae
orange1.1g000762m C. sinensis v1.1 124251658 Patched family protein 1 5268 Malvidae
AT1G42470.1 A. thaliana TAIR10 124251658 Patched family protein 2 5268 Malvidae
Thhalv10016155m E. salsugineum v1.0 124251658 Patched family protein 2 5268 Malvidae
Thhalv10024233m E. salsugineum v1.0 124251658 Patched family protein 2 5268 Malvidae
Ciclev10000039m C. clementina v1.0 124251658 Patched family protein 1 5268 Malvidae
Lus10016019 L. usitatissimum v1.0 124251658 Patched family protein 1 5268 Malvidae
Gorai.002G115700.1 G. raimondii v2.1 124251658 Patched family protein 2 5268 Malvidae
Gorai.002G206800.1 G. raimondii v2.1 124251658 Patched family protein 2 5268 Malvidae
Thecc1EG034394t1 T. cacao v1.1 124251658 Patched family protein 2 5268 Malvidae
Thecc1EG006451t1 T. cacao v1.1 124251658 Patched family protein 2 5268 Malvidae
Araha.2147s0002.1.p A. halleri v1.1 124251658 Patched family protein 2 5268 Malvidae
Cagra.6119s0004.1.p C. grandiflora v1.1 124251658 Patched family protein 2 5268 Malvidae
Cagra.1383s0022.1.p C. grandiflora v1.1 124251658 Patched family protein 2 5268 Malvidae
Brara.G01340.1.p B. rapa FPsc v1.3 124251658 Patched family protein 2 5268 Malvidae
Bostr.25542s0021.1.p B. stricta v1.2 124251658 Patched family protein 2 5268 Malvidae
SapurV1A.0016s0640.1.p S. purpurea v1.0 124251658 Patched family protein 3 5268 Malvidae
SapurV1A.0374s0250.1.p S. purpurea v1.0 124251658 Patched family protein 3 5268 Malvidae
Manes.05G130900.1.p M. esculenta v6.1 124251658 Patched family protein 2 5268 Malvidae
Manes.18G004200.1.p M. esculenta v6.1 124251658 Patched family protein 2 5268 Malvidae
AL7G10220.t1 A. lyrata v2.1 124251658 Patched family protein 2 5268 Malvidae
AL1G51340.t1 A. lyrata v2.1 124251658 Patched family protein 2 5268 Malvidae