Gene : Cagra.6119s0004 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10796 - PATCHED-RELATED Genomic Order:  4
Name:  ? Cagra.6119s0004 Secondary Identifier:  ? PAC:28919805
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.6119s0004 0.5kb upstream 0.5kb upstream 8349 true Scaffold6119: 18106-26454 Capsella grandiflora
Cagra.6119s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold6119: 25955-26454 Capsella grandiflora
Cagra.6119s0004 0.5kb downstream 0.5kb downstream 8349 true Scaffold6119: 17606-25954 Capsella grandiflora
Cagra.6119s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold6119: 17606-18105 Capsella grandiflora
Cagra.6119s0004 1.0kb upstream 1.0kb upstream 8849 true Scaffold6119: 18106-26954 Capsella grandiflora
Cagra.6119s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold6119: 25955-26954 Capsella grandiflora
Cagra.6119s0004 1.0kb downstream 1.0kb downstream 8849 true Scaffold6119: 17106-25954 Capsella grandiflora
Cagra.6119s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold6119: 17106-18105 Capsella grandiflora
Cagra.6119s0004 2.0kb upstream 2.0kb upstream 9268 true Scaffold6119: 18106-27373 Capsella grandiflora
Cagra.6119s0004 2.0kb upstream 2.0kb upstream 1419 false Scaffold6119: 25955-27373 Capsella grandiflora
Cagra.6119s0004 2.0kb downstream 2.0kb downstream 9849 true Scaffold6119: 16106-25954 Capsella grandiflora
Cagra.6119s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold6119: 16106-18105 Capsella grandiflora
Cagra.6119s0004 5.0kb upstream 5.0kb upstream 9268 true Scaffold6119: 18106-27373 Capsella grandiflora
Cagra.6119s0004 5.0kb upstream 5.0kb upstream 1419 false Scaffold6119: 25955-27373 Capsella grandiflora
Cagra.6119s0004 5.0kb downstream 5.0kb downstream 12849 true Scaffold6119: 13106-25954 Capsella grandiflora
Cagra.6119s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold6119: 13106-18105 Capsella grandiflora
Cagra.6119s0004 10.0kb upstream 10.0kb upstream 9268 true Scaffold6119: 18106-27373 Capsella grandiflora
Cagra.6119s0004 10.0kb upstream 10.0kb upstream 1419 false Scaffold6119: 25955-27373 Capsella grandiflora
Cagra.6119s0004 10.0kb downstream 10.0kb downstream 17849 true Scaffold6119: 8106-25954 Capsella grandiflora
Cagra.6119s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold6119: 8106-18105 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367660 5261 Brassicaceae View MSA
123827805 5264 Brassicales-Malvales View MSA
124346774 5266 SBM View MSA
124251658 5268 Malvidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain