Gene : Cagra.1383s0022 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10796 - PATCHED-RELATED Genomic Order:  22
Name:  ? Cagra.1383s0022 Secondary Identifier:  ? PAC:28901778
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1383s0022 0.5kb upstream 0.5kb upstream 9613 true Scaffold1383: 65005-74617 Capsella grandiflora
Cagra.1383s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold1383: 74118-74617 Capsella grandiflora
Cagra.1383s0022 0.5kb downstream 0.5kb downstream 9613 true Scaffold1383: 64505-74117 Capsella grandiflora
Cagra.1383s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold1383: 64505-65004 Capsella grandiflora
Cagra.1383s0022 1.0kb upstream 1.0kb upstream 10113 true Scaffold1383: 65005-75117 Capsella grandiflora
Cagra.1383s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold1383: 74118-75117 Capsella grandiflora
Cagra.1383s0022 1.0kb downstream 1.0kb downstream 10113 true Scaffold1383: 64005-74117 Capsella grandiflora
Cagra.1383s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold1383: 64005-65004 Capsella grandiflora
Cagra.1383s0022 2.0kb upstream 2.0kb upstream 11113 true Scaffold1383: 65005-76117 Capsella grandiflora
Cagra.1383s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold1383: 74118-76117 Capsella grandiflora
Cagra.1383s0022 2.0kb downstream 2.0kb downstream 11113 true Scaffold1383: 63005-74117 Capsella grandiflora
Cagra.1383s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold1383: 63005-65004 Capsella grandiflora
Cagra.1383s0022 5.0kb upstream 5.0kb upstream 14113 true Scaffold1383: 65005-79117 Capsella grandiflora
Cagra.1383s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold1383: 74118-79117 Capsella grandiflora
Cagra.1383s0022 5.0kb downstream 5.0kb downstream 14113 true Scaffold1383: 60005-74117 Capsella grandiflora
Cagra.1383s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold1383: 60005-65004 Capsella grandiflora
Cagra.1383s0022 10.0kb upstream 10.0kb upstream 19113 true Scaffold1383: 65005-84117 Capsella grandiflora
Cagra.1383s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold1383: 74118-84117 Capsella grandiflora
Cagra.1383s0022 10.0kb downstream 10.0kb downstream 19113 true Scaffold1383: 55005-74117 Capsella grandiflora
Cagra.1383s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold1383: 55005-65004 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377308 5261 Brassicaceae View MSA
123834018 5264 Brassicales-Malvales View MSA
124346774 5266 SBM View MSA
124251658 5268 Malvidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain