Gene : Brara.G01340 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10796 - PATCHED-RELATED Genomic Order:  1340
Name:  ? Brara.G01340 Secondary Identifier:  ? PAC:30633521
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G01340 0.5kb upstream 0.5kb upstream 8740 true A07: 13931179-13939918 Brassica rapa FPsc
Brara.G01340 0.5kb upstream 0.5kb upstream 500 false A07: 13939419-13939918 Brassica rapa FPsc
Brara.G01340 0.5kb downstream 0.5kb downstream 8740 true A07: 13930679-13939418 Brassica rapa FPsc
Brara.G01340 0.5kb downstream 0.5kb downstream 500 false A07: 13930679-13931178 Brassica rapa FPsc
Brara.G01340 1.0kb upstream 1.0kb upstream 9240 true A07: 13931179-13940418 Brassica rapa FPsc
Brara.G01340 1.0kb upstream 1.0kb upstream 1000 false A07: 13939419-13940418 Brassica rapa FPsc
Brara.G01340 1.0kb downstream 1.0kb downstream 9240 true A07: 13930179-13939418 Brassica rapa FPsc
Brara.G01340 1.0kb downstream 1.0kb downstream 1000 false A07: 13930179-13931178 Brassica rapa FPsc
Brara.G01340 2.0kb upstream 2.0kb upstream 10240 true A07: 13931179-13941418 Brassica rapa FPsc
Brara.G01340 2.0kb upstream 2.0kb upstream 2000 false A07: 13939419-13941418 Brassica rapa FPsc
Brara.G01340 2.0kb downstream 2.0kb downstream 10240 true A07: 13929179-13939418 Brassica rapa FPsc
Brara.G01340 2.0kb downstream 2.0kb downstream 2000 false A07: 13929179-13931178 Brassica rapa FPsc
Brara.G01340 5.0kb upstream 5.0kb upstream 13240 true A07: 13931179-13944418 Brassica rapa FPsc
Brara.G01340 5.0kb upstream 5.0kb upstream 5000 false A07: 13939419-13944418 Brassica rapa FPsc
Brara.G01340 5.0kb downstream 5.0kb downstream 13240 true A07: 13926179-13939418 Brassica rapa FPsc
Brara.G01340 5.0kb downstream 5.0kb downstream 5000 false A07: 13926179-13931178 Brassica rapa FPsc
Brara.G01340 10.0kb upstream 10.0kb upstream 18240 true A07: 13931179-13949418 Brassica rapa FPsc
Brara.G01340 10.0kb upstream 10.0kb upstream 10000 false A07: 13939419-13949418 Brassica rapa FPsc
Brara.G01340 10.0kb downstream 10.0kb downstream 18240 true A07: 13921179-13939418 Brassica rapa FPsc
Brara.G01340 10.0kb downstream 10.0kb downstream 10000 false A07: 13921179-13931178 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351431 5261 Brassicaceae Singleton cluster - no MSA
123790317 5264 Brassicales-Malvales Singleton cluster - no MSA
124288279 5266 SBM Singleton cluster - no MSA
124251658 5268 Malvidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier