Gene : Araha.2147s0002 A. halleri v1.1

Defline:  (1 of 2) PTHR10796 - PATCHED-RELATED Genomic Order:  2
Name:  ? Araha.2147s0002 Secondary Identifier:  ? PAC:28841584

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.2147s0002 0.5kb upstream 0.5kb upstream 8876 true Scaffold2147: 14016-22891 Arabidopsis halleri
Araha.2147s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold2147: 22392-22891 Arabidopsis halleri
Araha.2147s0002 0.5kb downstream 0.5kb downstream 8876 true Scaffold2147: 13516-22391 Arabidopsis halleri
Araha.2147s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold2147: 13516-14015 Arabidopsis halleri
Araha.2147s0002 1.0kb upstream 1.0kb upstream 9376 true Scaffold2147: 14016-23391 Arabidopsis halleri
Araha.2147s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold2147: 22392-23391 Arabidopsis halleri
Araha.2147s0002 1.0kb downstream 1.0kb downstream 9376 true Scaffold2147: 13016-22391 Arabidopsis halleri
Araha.2147s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold2147: 13016-14015 Arabidopsis halleri
Araha.2147s0002 2.0kb upstream 2.0kb upstream 10376 true Scaffold2147: 14016-24391 Arabidopsis halleri
Araha.2147s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold2147: 22392-24391 Arabidopsis halleri
Araha.2147s0002 2.0kb downstream 2.0kb downstream 10376 true Scaffold2147: 12016-22391 Arabidopsis halleri
Araha.2147s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold2147: 12016-14015 Arabidopsis halleri
Araha.2147s0002 5.0kb upstream 5.0kb upstream 13376 true Scaffold2147: 14016-27391 Arabidopsis halleri
Araha.2147s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold2147: 22392-27391 Arabidopsis halleri
Araha.2147s0002 5.0kb downstream 5.0kb downstream 13376 true Scaffold2147: 9016-22391 Arabidopsis halleri
Araha.2147s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold2147: 9016-14015 Arabidopsis halleri
Araha.2147s0002 10.0kb upstream 10.0kb upstream 17257 true Scaffold2147: 14016-31272 Arabidopsis halleri
Araha.2147s0002 10.0kb upstream 10.0kb upstream 8881 false Scaffold2147: 22392-31272 Arabidopsis halleri
Araha.2147s0002 10.0kb downstream 10.0kb downstream 18376 true Scaffold2147: 4016-22391 Arabidopsis halleri
Araha.2147s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold2147: 4016-14015 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367660 5261 Brassicaceae View MSA
123827805 5264 Brassicales-Malvales View MSA
124346774 5266 SBM View MSA
124251658 5268 Malvidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain