Gene : Glyma.14G001500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10796 - PATCHED-RELATED Genomic Order:  15
Name:  ? Glyma.14G001500 Secondary Identifier:  ? PAC:30534749
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.14G001500 0.5kb upstream 0.5kb upstream 40396 true Chr14: 160087-200482 Glycine max
Glyma.14G001500 0.5kb upstream 0.5kb upstream 500 false Chr14: 160087-160586 Glycine max
Glyma.14G001500 0.5kb downstream 0.5kb downstream 40396 true Chr14: 160587-200982 Glycine max
Glyma.14G001500 0.5kb downstream 0.5kb downstream 500 false Chr14: 200483-200982 Glycine max
Glyma.14G001500 1.0kb upstream 1.0kb upstream 40896 true Chr14: 159587-200482 Glycine max
Glyma.14G001500 1.0kb upstream 1.0kb upstream 1000 false Chr14: 159587-160586 Glycine max
Glyma.14G001500 1.0kb downstream 1.0kb downstream 40896 true Chr14: 160587-201482 Glycine max
Glyma.14G001500 1.0kb downstream 1.0kb downstream 1000 false Chr14: 200483-201482 Glycine max
Glyma.14G001500 2.0kb upstream 2.0kb upstream 41896 true Chr14: 158587-200482 Glycine max
Glyma.14G001500 2.0kb upstream 2.0kb upstream 2000 false Chr14: 158587-160586 Glycine max
Glyma.14G001500 2.0kb downstream 2.0kb downstream 41896 true Chr14: 160587-202482 Glycine max
Glyma.14G001500 2.0kb downstream 2.0kb downstream 2000 false Chr14: 200483-202482 Glycine max
Glyma.14G001500 5.0kb upstream 5.0kb upstream 44896 true Chr14: 155587-200482 Glycine max
Glyma.14G001500 5.0kb upstream 5.0kb upstream 5000 false Chr14: 155587-160586 Glycine max
Glyma.14G001500 5.0kb downstream 5.0kb downstream 44896 true Chr14: 160587-205482 Glycine max
Glyma.14G001500 5.0kb downstream 5.0kb downstream 5000 false Chr14: 200483-205482 Glycine max
Glyma.14G001500 10.0kb upstream 10.0kb upstream 49896 true Chr14: 150587-200482 Glycine max
Glyma.14G001500 10.0kb upstream 10.0kb upstream 10000 false Chr14: 150587-160586 Glycine max
Glyma.14G001500 10.0kb downstream 10.0kb downstream 49896 true Chr14: 160587-210482 Glycine max
Glyma.14G001500 10.0kb downstream 10.0kb downstream 10000 false Chr14: 200483-210482 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312597 5265 Fabidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1815 0.0 47.0312    
cufflinks 10.7618 0.0 32.6972    
cufflinks 19.9552 0.0 67.3082   High
cufflinks 18.6912 0.0 61.5999   High
cufflinks 9.3347 0.0 31.8828   Low
cufflinks 9.24559 0.0 28.5568   Low
cufflinks 15.2147 0.0 47.8851    
cufflinks 12.8656 0.0 39.0907    
cufflinks 13.3285 0.0 41.0216    
cufflinks 0.48        
cufflinks 0.166       Low
cufflinks 0.875       High
cufflinks 0.465        
cufflinks 0.477        
cufflinks 0.38        
cufflinks 0.392        
cufflinks 0.439        
cufflinks 1.118       High
cufflinks 0.616        
cufflinks 0.577        
cufflinks 0.188       Low
cufflinks 0.527        
cufflinks 0.439        
cufflinks 0.21       Low
cufflinks 0.453        
cufflinks 0.299        

0 Strain