Gene : Glyma.04G017300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10796 - PATCHED-RELATED Genomic Order:  173
Name:  ? Glyma.04G017300 Secondary Identifier:  ? PAC:30488859
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G017300 0.5kb upstream 0.5kb upstream 17839 true Chr04: 1329967-1347805 Glycine max
Glyma.04G017300 0.5kb upstream 0.5kb upstream 500 false Chr04: 1329967-1330466 Glycine max
Glyma.04G017300 0.5kb downstream 0.5kb downstream 17839 true Chr04: 1330467-1348305 Glycine max
Glyma.04G017300 0.5kb downstream 0.5kb downstream 500 false Chr04: 1347806-1348305 Glycine max
Glyma.04G017300 1.0kb upstream 1.0kb upstream 18339 true Chr04: 1329467-1347805 Glycine max
Glyma.04G017300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1329467-1330466 Glycine max
Glyma.04G017300 1.0kb downstream 1.0kb downstream 18339 true Chr04: 1330467-1348805 Glycine max
Glyma.04G017300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1347806-1348805 Glycine max
Glyma.04G017300 2.0kb upstream 2.0kb upstream 19339 true Chr04: 1328467-1347805 Glycine max
Glyma.04G017300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1328467-1330466 Glycine max
Glyma.04G017300 2.0kb downstream 2.0kb downstream 19339 true Chr04: 1330467-1349805 Glycine max
Glyma.04G017300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1347806-1349805 Glycine max
Glyma.04G017300 5.0kb upstream 5.0kb upstream 22339 true Chr04: 1325467-1347805 Glycine max
Glyma.04G017300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1325467-1330466 Glycine max
Glyma.04G017300 5.0kb downstream 5.0kb downstream 22339 true Chr04: 1330467-1352805 Glycine max
Glyma.04G017300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1347806-1352805 Glycine max
Glyma.04G017300 10.0kb upstream 10.0kb upstream 27339 true Chr04: 1320467-1347805 Glycine max
Glyma.04G017300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1320467-1330466 Glycine max
Glyma.04G017300 10.0kb downstream 10.0kb downstream 27339 true Chr04: 1330467-1357805 Glycine max
Glyma.04G017300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1347806-1357805 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312597 5265 Fabidae View MSA
124071580 5270 Rosid View MSA
123738357 5271 Pentapetalae View MSA
122785760 5272 Eudicot View MSA
122045765 5273 Angiosperm View MSA
123429105 5275 Viridiplantae View MSA
121349896 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.03504 0.0 27.0348    
cufflinks 7.29021 0.0 21.6372    
cufflinks 6.50422 0.0 19.3251    
cufflinks 20.7621 0.0 84.0745 High High
cufflinks 5.2888 0.0 19.1965    
cufflinks 4.50238 0.0 13.8116   Low
cufflinks 8.06615 0.0 28.6547    
cufflinks 12.3624 0.0 45.3096    
cufflinks 5.41721 0.0 16.3459    
cufflinks 1.77       High
cufflinks 0.147       Low
cufflinks 1.048        
cufflinks 0.934        
cufflinks 0.699        
cufflinks 0.158       Low
cufflinks 1.13        
cufflinks 0.903        
cufflinks 1.127        
cufflinks 1.833       High
cufflinks 1.074        
cufflinks 0.242       Low
cufflinks 1.371        
cufflinks 1.471        
cufflinks 0.214       Low
cufflinks 1.143        
cufflinks 0.342        

0 Strain